Table 1.
General information on the STR loci selected by Hares [2], including chromosomal location, loci in kits or panels, mutation rates, and match probabilities, based on a Caucasian population1-3
| Locus | Panels/Kits | Location | Size, Mb | Mutation rate | MP7 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| 13 Core loci | New FBI core loci4 | European loci5 | Identifiler | PowerPlex 16 | China6 | Paternal | Maternal | ||||
| D1S1656 | A | S | 1q42 | 228.972 | 1.54 × 10-3 | 3.70 × 10-4 | 0.019 | ||||
| D2S441 | A | S | 2p14 | 68.214 | 1.54 × 10-3 | 3.70 × 10-4 | 0.095 | ||||
| D2S1338 | A | D | √ | 2q35 | 218.705 | 1.36 × 10-3 | 2.49 × 10-4 | 0.028 | |||
| D3S1358 | √ | A | S | √ | √ | √ | 3p21.31 | 45.543 | 1.68 × 10-3 | 2.55 × 10-4 | 0.076 |
| FGA | √ | A | S | √ | √ | √ | 4q28 | 155.866 | 3.71 × 10-3 | 4.93 × 10-4 | 0.038 |
| D5S818 | √ | A | √ | √ | √ | 5q23.2 | 123.139 | 1.66 × 10-3 | 2.69 × 10-4 | 0.158 | |
| CSF1PO | √ | A | √ | √ | √ | 5q33.1 | 149.436 | 1.98 × 10-3 | 3.19 × 10-4 | 0.118 | |
| D7S820 | √ | A | √ | √ | √ | 7q21.11 | 83.433 | 1.37 × 10-3 | 7.23 × 10-5 | 0.065 | |
| D8S1179 | √ | A | S | √ | √ | √ | 8q24.13 | 125.976 | 2.06 × 10-3 | 3.33 × 10-4 | 0.061 |
| D10S1248 | A | S | 10q26.3 | 130.567 | 1.54 × 10-3 | 3.70 × 10-4 | 0.092 | ||||
| TH01 | √ | A | S | √ | √ | 11p15.5 | 2.149 | 5.20 × 10-5 | 6.03 × 10-5 | 0.081 | |
| D12S391 | A | S | 12p13.2 | 12.215 | 1.54 × 10-3 | 3.70 × 10-4 | 0.02 | ||||
| VWA | √ | A | S | √ | √ | √ | 12p13.31 | 5.963 | 3.25 × 10-3 | 4.68 × 10-4 | 0.063 |
| D13S317 | √ | A | √ | √ | √ | 13q31.1 | 81.620 | 1.74 × 10-3 | 4.03 × 10-4 | 0.085 | |
| PentaE | A | √ | 15q26.2 | 95.175 | 2.60 × 10-4 | 2.53 × 10-4 | 0.02 | ||||
| D16S539 | √ | A | D | √ | √ | √ | 16q24.1 | 84.944 | 1.03 × 10-3 | 5.25 × 10-4 | 0.1 |
| D18S51 | √ | A | S | √ | √ | √ | 18q21.33 | 59.100 | 2.23 × 10-3 | 7.93 × 10-4 | 0.029 |
| D19S433 | A | D | √ | 19q12 | 35.109 | 9.75 × 10-4 | 5.48 × 10-4 | 0.088 | |||
| D21S11 | √ | A | S | √ | √ | √ | 21q21.1 | 19.476 | 1.75 × 10-3 | 1.18 × 10-3 | 0.046 |
| DYS391 | A | Yq11.21 | 14.103 | 1.70 × 10-3 | - | 0.455 | |||||
| TPOX | √ | B | √ | √ | 2p25.3 | 1.472 | 1.65 × 10-4 | 1.05 × 10-4 | 0.195 | ||
| SE33 | B | D | 6q14 | 89.043 | 6.40 × 10-3 | 3.00 × 10-3 | 0.005 | ||||
| PentaD | B | √ | 21q22.3 | 43.880 | 2.59 × 10-4 | 2.53 × 10-4 | 0.049 | ||||
| D22S1045 | B | S | 22q12.3 | 35.779 | 1.54 × 10-3 | 3.70 × 10-4 | 0.134 | ||||
| Loci, n | 13 | 20 + 4 | 12 + 4 | 15 | 15 | 11 | |||||
1Amelogenin is not included.
2'√' means that the locus is in the particular panel.
3The table is sorted by chromosome and location, and sections A and B loci are separated.
4'New FBI core' refers to the panel described by Hares [2]. 'A' and 'B' denote the loci placed into sections A and B, respectively.
5'S' denotes the loci in European Standard Set (ESS); 'D' denotes additional loci to expand the European Standard Set. The European loci panel differs by one locus (SE33) from the NGM loci [7].
6Eleven STR loci common to five major commercial kits used in China: Identifiler, Sinofiler, PowerPlex16, DNAtyper15, and AGCU (17+1) [24].
7MP, match probability.