Table 2. Secondary structure alignments with other known TPR domains.
KLC1-TPR | KLC2-TPR | ||
HOP1 TPR1A | Z-Score | 9.8 | 11.5 |
(PDB: 1ELW) | Aligned Residuesa | 117 | 114 |
RMSDb | 2.1 Å | 2.8 Å | |
TPR Repeatsc | 2–4 | 2–4 | |
PP5 | Z-Score | 10.5 | 11.9 |
(PDB: 1A17) | Aligned Residuesa | 124 | 109 |
RMSDb | 2.8 Å | 3.0 Å | |
TPR Repeatsc | 3–5 | 2–4 | |
PEX5P | Z-Score | 13.1 | 13.6 |
(PDB: 2J9Q) | Aligned Residuesa | 157 | 157 |
RMSDb | 3.2 Å | 2.8 Å | |
TPR Repeatsc | 2–6 | 2–6 | |
SGT | Z-Score | 10.3 | 11.4 |
(PDB: 2VYI) | Aligned Residuesa | 123 | 123 |
RMSDb | 2.6 Å | 3.0 Å | |
TPR Repeatsc | 2–4 | 2–4 | |
Consensus | Z-Score | 12.7 | 13.4 |
(PDB: 2FO7) | Aligned Residuesa | 126 | 123 |
RMSDb | 2.1 Å | 2.8 Å | |
TPR Repeatsc | 3–6 | 1–4 | |
P67phox | Z-Score | 13 | 12.5 |
(PDB: 1WM5) | Aligned Residuesa | 157 | 157 |
RMSDb | 2.6 Å | 2.9 Å | |
TPR Repeatsc | 1–4 | 2–5 |
Aligned Residues: Number of aligned residues.
RMSD: Root mean square deviation.
TPR Repeats: TPR repeats of KLCs that were aligned.