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. 2012 Mar 28;7(3):e33943. doi: 10.1371/journal.pone.0033943

Table 2. Secondary structure alignments with other known TPR domains.

KLC1-TPR KLC2-TPR
HOP1 TPR1A Z-Score 9.8 11.5
(PDB: 1ELW) Aligned Residuesa 117 114
RMSDb 2.1 Å 2.8 Å
TPR Repeatsc 2–4 2–4
PP5 Z-Score 10.5 11.9
(PDB: 1A17) Aligned Residuesa 124 109
RMSDb 2.8 Å 3.0 Å
TPR Repeatsc 3–5 2–4
PEX5P Z-Score 13.1 13.6
(PDB: 2J9Q) Aligned Residuesa 157 157
RMSDb 3.2 Å 2.8 Å
TPR Repeatsc 2–6 2–6
SGT Z-Score 10.3 11.4
(PDB: 2VYI) Aligned Residuesa 123 123
RMSDb 2.6 Å 3.0 Å
TPR Repeatsc 2–4 2–4
Consensus Z-Score 12.7 13.4
(PDB: 2FO7) Aligned Residuesa 126 123
RMSDb 2.1 Å 2.8 Å
TPR Repeatsc 3–6 1–4
P67phox Z-Score 13 12.5
(PDB: 1WM5) Aligned Residuesa 157 157
RMSDb 2.6 Å 2.9 Å
TPR Repeatsc 1–4 2–5
a

Aligned Residues: Number of aligned residues.

b

RMSD: Root mean square deviation.

c

TPR Repeats: TPR repeats of KLCs that were aligned.