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. 2012 Jan 26;55(5):2035–2047. doi: 10.1021/jm201217q

Table 3. Linear Response Correlations Using eq 5 for Individual Steps: Optimized Coefficients and Descriptive Statistical Indicesa.

step α × 10–3(mol/kcal)b β × 10–4(mol/kcal)c γ × 10–3(1/Å2)d κ r2 RMSE
1. docking 0.0878 ± 0.115     7.292 ± 0.238 0.002 0.741
2. QM/MM optimization –0.3868 ± 21.25   –7.354 ± 46.51 4.107 ± 27.44 0.202 0.663
3. MD simulation 10.47 ± 54.29 5.709 ± 62.32 –11.61 ± 86.56 5.417 ± 38.22 0.353 0.597
4. single-point QM/MM –1.326 ± 0.591   –7.761 ± 2.261 1.160 ± 0.358 0.906 0.228
a

The squared correlation coefficient (r2) and the root-mean-square error (RMSE).

b

Scales the QM/MM energy term (eq 5) in rows 2 and 4, and the vdW energy term in row 3.

c

Scales the electrostatic energy term.

d

Scales the SASA term.