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. 2012 Feb 5;3(1):1–17.

Table 4.

Relation of LIG1 haplotypes and diplotypes and XPA haplotypes to lung cancer risk in non- Hispanic white participants

LIG1 Haplotypes        
rs274883 rs3731014 rs3731007 rs156640 rs156641 rs754948 rs20580 rs8100261   Cases (%) Controls (%) OR (95% CI)a
A G G C G C C A   43.1 46.3 1.00 (reference)
A G G G A C A G   39.7 35.0 1.22 (1.06-1.41)
G A G C G C A G   9.3 10.4 0.95 (0.76-1.18)
G G A G G T C G   3.9 4.4 0.97 (0.70-1.35)
G A G C G C A A   1.4 1.8 0.79 (0.47-1.33)
G G A G G C C G   1.9 1.1 1.88 (1.13-3.14)
* * * * * * * *   0.7 1.0 0.71 (0.30-1.70)
                  global p-value = 0.008
LIG1 Diplotypes Cases (n) Controls (n) OR (95% CI)a
rs156640 rs156641 rs8100261

CC GG AA 146 340 1.00 (reference)
CG AG AG 267 523 1.17 (0.92-1.50)
GG AA GG 119 163 1.69 (1.24-2.30)
CC GG AG 61 137 1.00 (0.70-1.44)
CG AG GG 47 118 0.92 (0.62-1.35)
CG GG AG 38 69 1.27 (0.81-1.98)
GG AG GG 35 65 1.24 (0.79-1.96)
Other genotype combinations 25 50 1.14 (0.68-1.92)

XPA Haplotypes Cases (%) Controls (%) OR (95% CI)a
rs3176757 rs3176748 rs2808667 rs2805835 rs3176689 rs3176683 rs3176658 rs3176633 rs1800975

G G G G A A G C G 31.6 31.7 1.00 (reference)
G A G G T A G C G 16.7 16.7 1.00 (0.83-1.21)
G A G C A A G C G 10.2 11.3 0.92 (0.73-1.15)
G A G G A A G C G 9.1 6.3 1.47 (1.14-1.91)
G A G G A A A C A 6.1 7.2 0.86 (0.65-1.13)
G A A G A A A C A 5.7 6.5 0.89 (0.68-1.18)
A A G G A A G C A 6.4 5.0 1.31 (0.99-1.75)
A A G G A A G G A 8.6 8.0 1.08 (0.85-1.38)
A A G G A G G G A 5.4 6.7 0.79 (0.60-1.06)
* * * * * * * * * 0.2 0.6 0.97 (0.17-5.68)
                  global p-value = 0.01
a

Adjusted for age, sex, smoking status, occupational asbestos exposure, and enrollment year