Table 4.
Relation of LIG1 haplotypes and diplotypes and XPA haplotypes to lung cancer risk in non- Hispanic white participants
LIG1 Haplotypes | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
rs274883 | rs3731014 | rs3731007 | rs156640 | rs156641 | rs754948 | rs20580 | rs8100261 | Cases (%) | Controls (%) | OR (95% CI)a | |
A | G | G | C | G | C | C | A | 43.1 | 46.3 | 1.00 (reference) | |
A | G | G | G | A | C | A | G | 39.7 | 35.0 | 1.22 (1.06-1.41) | |
G | A | G | C | G | C | A | G | 9.3 | 10.4 | 0.95 (0.76-1.18) | |
G | G | A | G | G | T | C | G | 3.9 | 4.4 | 0.97 (0.70-1.35) | |
G | A | G | C | G | C | A | A | 1.4 | 1.8 | 0.79 (0.47-1.33) | |
G | G | A | G | G | C | C | G | 1.9 | 1.1 | 1.88 (1.13-3.14) | |
* | * | * | * | * | * | * | * | 0.7 | 1.0 | 0.71 (0.30-1.70) | |
global p-value = 0.008 | |||||||||||
LIG1 Diplotypes | Cases (n) | Controls (n) | OR (95% CI)a | ||||||||
rs156640 | rs156641 | rs8100261 | |||||||||
CC | GG | AA | 146 | 340 | 1.00 (reference) | ||||||
CG | AG | AG | 267 | 523 | 1.17 (0.92-1.50) | ||||||
GG | AA | GG | 119 | 163 | 1.69 (1.24-2.30) | ||||||
CC | GG | AG | 61 | 137 | 1.00 (0.70-1.44) | ||||||
CG | AG | GG | 47 | 118 | 0.92 (0.62-1.35) | ||||||
CG | GG | AG | 38 | 69 | 1.27 (0.81-1.98) | ||||||
GG | AG | GG | 35 | 65 | 1.24 (0.79-1.96) | ||||||
Other genotype combinations | 25 | 50 | 1.14 (0.68-1.92) | ||||||||
XPA Haplotypes | Cases (%) | Controls (%) | OR (95% CI)a | ||||||||
rs3176757 | rs3176748 | rs2808667 | rs2805835 | rs3176689 | rs3176683 | rs3176658 | rs3176633 | rs1800975 | |||
G | G | G | G | A | A | G | C | G | 31.6 | 31.7 | 1.00 (reference) |
G | A | G | G | T | A | G | C | G | 16.7 | 16.7 | 1.00 (0.83-1.21) |
G | A | G | C | A | A | G | C | G | 10.2 | 11.3 | 0.92 (0.73-1.15) |
G | A | G | G | A | A | G | C | G | 9.1 | 6.3 | 1.47 (1.14-1.91) |
G | A | G | G | A | A | A | C | A | 6.1 | 7.2 | 0.86 (0.65-1.13) |
G | A | A | G | A | A | A | C | A | 5.7 | 6.5 | 0.89 (0.68-1.18) |
A | A | G | G | A | A | G | C | A | 6.4 | 5.0 | 1.31 (0.99-1.75) |
A | A | G | G | A | A | G | G | A | 8.6 | 8.0 | 1.08 (0.85-1.38) |
A | A | G | G | A | G | G | G | A | 5.4 | 6.7 | 0.79 (0.60-1.06) |
* | * | * | * | * | * | * | * | * | 0.2 | 0.6 | 0.97 (0.17-5.68) |
global p-value = 0.01 |
Adjusted for age, sex, smoking status, occupational asbestos exposure, and enrollment year