Table 1.
Quantitative real-time PCR results compared with array CGH.
| cDNA clone | Gene | Location | Gene relative quantity by Q-PCR | Copy number by aCGH | ||
|---|---|---|---|---|---|---|
| Control | SCOMP | DOP | ||||
| H17813 | TOP2A | 17q21 | 5.86 | ++ | +++ | N |
| H59203 | CDC6 | 17q21.3 | 2.87 | +++ | ++++ | N |
| H23044 | TEM7 | 17q21.1 | 2.45 | ++ | +++ | + |
| H64260 | PRKAG2 | 7q35 | 2.23 | N | N | N |
| H18802 | Link-GEFII | 17q21.1 | 2.19 | ++++ | ++++ | + |
| H46384 | PRO2521 | 17q21.1 | 2.18 | ++++ | ++ | N |
| T85025 | 1.97 | ++++ | ++++ | N | ||
| H29706 | GPC5 | 13q32 | 1.79 | +++ | ++++ | N |
| H59714 | AK2 | 1p34 | 1.58 | ++ | +++ | N |
| 321749 | 1.55 | + | +++ | N | ||
| H20867 | PCDH9 | 13q14.3 | 1.46 | +++ | ++++ | N |
| H93272 | CPM | 12q15 | 1.42 | + | + | N |
| AA011584 | 1.38 | + | ++ | + | ||
| W24419 | 1.36 | +++ | + | N | ||
| H85791 | 1.32 | + + + | + | |||
| H01255 | CLN5 | 13q21.1 | 1.22 | +++ | ++ | + |
| H62028 | DYRK3 | 1q32 | 1.18 | + | + | + |
| H14685 | PTK2 | 8q24 | 1.06 | N | N | N |
| R06520 | PRKCBP1 | 20q13.12 | 0.98 | N | N | N |
| R24935 | CDA08 | 16q11.2 | 0.76 | − | N | N |
| H46055 | KIAA0725 | 8p11.21 | 0.75 | + | N | N |
| H53288 | BAG4 | 8p11.21 | 0.71 | N | N | N |
“−” Ratio less than 0.7, N = 0.7 − 1.3, “+” ratio greater than 1.3.
“++” Ratio greater than 2, “+++” ratio greater than 3, “++++” Ratio greater than 5.