Table 1.
Gene product* | Relevance | Ratio** OVA/SAL | P value*** |
---|---|---|---|
Ccl12 | Chemokine of CC family which attracts eosinophils and monocytes | 10.64 | 0.008 |
Ccl7 | Chemokine of CC family which attracts monocytes and regulates macrophage function | 8.98 | 0.018 |
NAIP 1 (neuronal apoptosis inhibitor protein) | Endogenous caspase inhibitor which binds to the inflammasome in neuronal and nonneuronal cell types | 8.57 | 0.000 |
Cxcl3 | CXC chemokine which controls migration and adhesion of monocytes | 8.31 | 0.016 |
IL-6 | Th2 cytokine which promotes airway inflammation in mice | 3.08 | 0.050 |
IL-33 | IL-1 like cytokine which mediates eosinophilia in mouse asthma model | 2.54 | 0.001 |
ASC | Adaptor protein which recruits caspase-1 to the NLRP3 complex | 2.11 | 0.001 |
Caspase 1 | When activated, it processes pro-IL1b and pro-IL18 to mature cytokines | 2.07 | 0.000 |
Aim2 (absent in melanoma gene 2) | Component of the AIM2 Inflammasome which activates caspase-1 independent of NLR proteins | 2.00 | 0.002 |
NLRP1a | Component of the NLRP1 Inflammasome which activates caspases 1 and 5 | 1.07 | 0.658 |
NLRC4 (IPAF) | Component of the NLRP4 Inflammasome which mediates response to S. typhimurium | 0.90 | 0.434 |
IL-1β | Member of IL-1 family of cytokines | 0.48 | 0.003 |
NLRP3 | Component of the NLRP3 Inflammasome which activates caspases 1 | 0.28 | 0.000 |
IL-18 | Member of IL-1 family of cytokines | 0.09 | 0.000 |
*Data from a superarray experiment on lung RNA from 8 SAL and 8 OVA-treated mice. Genes relevant to the asthma/inflammasome pathways are shown. **Fold up- or downregulation for OVA-treated mice relative to saline-treated mice was determined by the ΔΔCt method. Ratios are in decreasing order; ratios >1 represent increased expression with airway inflammation and ratios <1 represent decreased expression with airway inflammation. Upregulation of Caspase-1 and downregulation of IL-1β were also confirmed by an “in-house” RT-PCR assay. ***Student T-test.