Table 1.
Genomic islands identified in the two pneumonic pathogens C. pneumoniae and S. pneumoniae.
| Species | Segment | Start | End | h value | BCN | T (Transposase) or I (Integrase) | IS or Transposon |
|---|---|---|---|---|---|---|---|
| C. pneumoniae CWL029 | CPnGI01 | 470980 | 599631 | 0.034 | 18 | ||
| S. pneumoniae G54 | SPGGI01 | 137637 | 150199 | 0.048 | 21 | T (SPG_0139, SPG_0140) | |
| S. pneumoniae G54 | SPGGI02 | 224334 | 271125 | 0.021 | 20 | I (SPG_0281) | |
| S. pneumoniae G54 | SPGGI03 | 918880 | 947610 | 0.040 | 33 | T (SPG_0987) | |
| S. pneumoniae G54 | SPGGI04 | 1164899 | 1194336 | 0.057 | 21 | T (SPG_1195, SPG_1196, SPG_1200- SPG_1207) | Transposon (SPG_1225, SPG_1227, SPG_1228) IS (SPG_1196, SPG_1202-SPG_1207) |
| S. pneumoniae G54 | SPGGI05 | 1205234 | 1258720 | 0.083 | 37 | I (SPG_1258) T (SPG_1260) | Transposon (SPG_1242- SPG_1245, SPG_1250- SPG_1252, SPG_1259, SPG_1263-SPG_1267, SPG_1270-SPG_1273, SPG1275, SPG_1282, SPG_1285, SPG_1287- SPG_1293) |
| S. pneumoniae G54 | SPGGI06 | 1988635 | 2002624 | 0.011 | 31 | ||
| S. pneumoniae G54 | SPGGI07 | 2040970 | 2078937 | 0.077 | 21 | T (SPG_2157- SPG_2159) | IS (SPG_2157-SPG_2159) |