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. 2012 Jan 23;287(11):8356–8360. doi: 10.1074/jbc.M112.341024

TABLE 2.

Pattern of VDJ junctions cloned from B-splenocytes of 3′RR-deficient and WT mice

WT mice 3′RR-deficient mice
No. of analyzed sequences 100 89
CDR3 length 11.7 ± 7 11.4 ± 6
Total N sequences (VD + DJ) 104 88
Total N nucleotides (VD + DJ) 612 647
% N sequences 97.2 91.7
Mean N nucleotides/sequences 5.8 7.3
Total P sequences (VD + DJ) 35 27
Total P nucleotides (VD + DJ) 55 53
% P sequences 32.7 28.1
Mean P nucleotides/sequences 1.6 1.9
% functional sequences 80.0 89.9
D usage WT mice
3′RR-deficient mice
% No. % No.
DFL16,3 5.00 5 3.37 3
DST4,2 6.00 6 0.00 0
DFL16,1 28.00 28 22.47 20
DSP2,9 9.00 9 7.87 7
DSP2,3 5.00 5 7.87 7
DST4,3 3.00 3 2.25 2
DFL16,2 2.00 2 11.24 10
DSP2,5 9.00 9 10.11 9
DSP2,2 16.00 16 7.87 7
DSP2,11 4.00 4 12.36 11
DSP2,8 2.00 2 3.37 3
DSP2,7 0.00 0 2.25 2
DST4 4.00 4 4.49 4
DQ52 7.00 7 4.49 4