Table 3.
| DEIRA | E. coli | Genes |
|---|---|---|
| 1.69 | (0.91) | ATP-dependent protease LA (lon) (DR1974, DR0349)§ |
| 1.41 | ||
| 1.48 | − | Putative carboxyl-terminal protease (DR1551) |
| 1.47 | 1.52 | Cell division metallopeptidase (ftsH) (DRA0290, DR0583, DR1020)§ |
| (0.59) | ||
| (0.50) | ||
| 1.46 | − | Protease I (pfpI) (DR1199) |
| 1.41 | − | Serine protease, subtilase family (DR0812) |
| 1.38 | − | Serine protease, subtilase family (DRA0283) |
| 1.33 | − | Endopeptidase-related protein (DR1749)§ |
| (0.84) | ||
| 1.32 | 1.04 | ATP-dependent Clp protease, ATP-binding subunit (clpX) (DR1973) |
| 1.29 | − | Serine protease, subtilase family, C-terminal fragment (DR2322) |
| 1.28 | − | Zinc metalloendopeptidase, leishmanolysin family (DRA0249) |
| 1.13 | − | Signal peptidase I (DR1427, DR1737, DR1321)c |
| (0.78) | ||
| (0.67) | ||
| 1.08 | Putative peptidase (DR1346) | |
| 1.02 | Lipoprotein signal peptidase (lspA) (DR2388) | |
| (0.66) | 1.26 | Protease DO precursor (htrA) (DR1756) |
| − | 1.09 | Aminoacyl-histidine dipeptidase (pepD) |
| − | 1.32 | Putative integral membrane protease (hflC) |
Only genes that qualify as PHX in at least one of the two genomes are included.
Values for genes that do not qualify as PHX are shown in parentheses. Minus signifies the gene does not have a homolog in this genome.
For genes carrying multiple homologs in the same genome, the E(g) values for the homologous genes are given in the next line(s).