Table 1.
(a) Sequencing | |||
---|---|---|---|
Insert size | Total data (Gb) | Sequence coverage (X) | |
170~800 bp | 126.52 | 47 | |
Pair end libraries | 2~20k | 120.66 | 45 |
Total | 247.18 | 92 | |
| |||
(b) Assembly | |||
N50 (kb) | Longest (kb) | Size (Gb) | |
| |||
Contigs | 19.3 | 179 | 2.45 |
Scaffolds | 1,585 | 7,787 | 2.66 |
| |||
(c) Annotation | |||
Number | Total length (Mb) | % of the genome | |
| |||
Repeats | 3,090,116 | 666.7 | 25 |
Genes | 22,561 | 722.3 | 27.1 |
CDS | 181,641 | 32.5 | 1.2 |