Table 1.
Taxa-counting example of Rios Mesquites metagenomic short reads carrying a common SP.
| Index | Short read (translated to amino-acid string) | |
|---|---|---|
| 1 | ILTSSSPEGARDFLVPSRLNPGKFYALPQAPQQFKQLI | |
| 2 | VFFSFLLGFTKGKFYALPQAPQTILSNLFMVSGFDKYFTNC | X |
| 3 | PSRLNPGKFYALPQAPQQFKQLIMVSGFDRYFQIAPCFR | |
| 4 | DFLVPSRLHKGKFYALPQAPQQFKQLVMVSGFDKYFQI | X |
| 5 | RFFSSFLGLHKGKFYALPQAPQQFKLTCHGIRVILSN | X |
| 6 | GARDFLVPSRLNPGKFYALPQAPQQFKQLIMVSGFD | |
| 7 | ARDFLVPSRLNPGKFYALPQAPQQFKQLVMVSGFDRYFQI | X |
| 8 | DFLVPSRLNPGKFYALPQAPQQFKQLIMVSGFDKYFQIA | |
| 9 | DFLVPSRLHKGKFYALPQAPQQFKQLVMVSGFDKYFQL | X |
| 10 | SRLNPGKFYALPQAPQQFKQLIMVSGFDRYFQIAPCF | |
| 11 | YFLVPSRLHKGKFYALPQAPQQFKLTCHGIRVILSNC | X |
| 12 | QAGCGLYCSKQIKSWKFYALPQAPQQFKQLIMI | X |
| 13 | LNPGKFYALPQAPQQFKQLIMVSGFDRYFQIAPCFR | |
| 14 | SFKSRKFYALPQAPQQFKQLIMVSGFDRYFQIAPCFG | X |
| 3 = 3U10U13 | PSRLNPGKFYALPQAPQQFKQLIMVSGFDRYFQIAPCFR | X |
| 1U6U8 | ILTSSSPEGARDFLVPSRLNPGKFYALPQAPQQFKQLIMVSGFDKYFQIA | X |
The first 14 rows display the short reads. The two last rows are fused strings of short reads used for solving the minimal chromatic number problem. Entries in the last column indicate 10 independent sequences (inconsistent with each other).