Table 1. Immunocytochemistry Protocols.
antibody | fixative solution | postfix | block | primary | wash | secondary |
Fibroblast growth factor receptor, FGFR (mouse) | M/F (9∶1) on ice; ON, −20°C | No | 0.1% T, 0.1% A, 2% BSA in TBS; 1 hr, RT | 2 ul in 500 ul in block; ON, RT | 0.1% T in TBS | 2 ul Cy3 Goat anti-mouse IgG+IgM in 500 ul block; ON, RT |
HSPG (mouse) | M/F (9∶1) on ice; ON, −20°C | No | 0.1% A, 2% BSA in PBS; 1 hr, RT | 1 ul in 500 ul in block; ON, RT | 0.1% T in PBS | 2 ul Cy3 Goat anti-mouse IgG+IgM in 500 ul block; ON, RT |
Activated FGFR, pFGFR (rabbit) | M/F (9∶1) on ice; ON, −20°C | No | 0.1% T, 0.1% A, 2% BSA in TBS; 1 hr, RT | 1 ul in 500 ul block; ON, RT | 0.1% T in TBS | 2 ul Cy3 Goat anti-rabbit in 500 ul block; ON, RT |
Activated Epidermal growth factor receptor, pEGFR (rabbit) | 2.5% P, 1% G, 1% SMB, in 0.1 M cacodylate buffer, pH 7.2; ON, 4°C after microwave | NaBH4 | 0.1% T, 0.1% A, 2% BSA in TBS; 1 hr, RT | 1 ul in 500 ul block; ON, RT | 0.1% T in TBS | 2 ul Cy3 Goat anti-rabbit in 500 ul block; ON, RT |
Manduca Fasciclin II, C3 (mouse) | 4% P or 4%P, 0.1% G, in 0.1 M PB | No | 0.5% T, 0.1% A, 2% BSA in TBS; 1 hr, RT | 1∶10,000 in 500 ul block; ON, RT | 0.1% T in TBS | 2 ul Cy3 Goat anti-mouse IgG+IgM in 500 ul block; ON, RT |
Phospho-histone H3 (rabbit) | 4% P in 0.1 M PB; ON, 4°C | DNAse | 0.5% T, 0.1% A, 2% NGS in PBS; 1 hr, RT | 1.5 ul in 500 ul block; ON, RT | 0.1% T in PBS | 2.5 ul Cy3 Goat anti-rabbit F(ab)2 in 500 ul PBS with 0.1% A, 0.1% T; 3–4 hrs, RT |
Ankyrin B (mouse) | 2.5% P, 1% G, 1% SMB in 50 mM carbonate buffer (pH 9.4), final pH 10.8; ON, 4°C after microwave | NaBH4 | 0.1% T, 0.1% A, 2% BSA in TBS; 1 hr, RT | 2 ul in 500 ul block; ON, RT | 0.1% T in TBS | 2 ul Cy3 Goat anti-mouse IgG+IgM in 500 ul block; ON, RT, then 2 ul Alexa 564-Donkey anti-goat in 500 ul block, ON, RT |
Microwave protocol: 18°C; Power level 2; 2 min on/2 min off/2 min on/2 min off.
Pella research-grade oven (# 3450, with variable power controller #3430 and cold spot).
A: sodium azide.
Alexa 564-Donkey anti-goat tertiary (Molecular Probes #A11056).
BSA: bovine serum albumin, IgG-free (Jackson Immunoresearch #001-000-161).
Cy3-Goat anti-mouse secondary (Jackson #115-165-068).
Cy3-Goat anti-rabbit secondary (Jackson # 111-165-144).
Cy3-Goat anti-rabbit F(ab)2 (Jackson # 111-166-047).
DNAse I (Sigma): 10 U DNAse, 4 mM MgCl2 in PBS; 1 hr, 37°C.
G: glutaraldehyde.
M/F: methanol/37% formalin.
NaBH4: 0.01 M NaBH4, 0.5% SMB in 0.05 M Tris HCl, pH 7.5; 30 min.
NGS: normal goal serum.
ON: overnight on a shaker.
P: paraformaldehyde.
PB: phospate buffer pH 7.4.
PBS: phosphate-buffered saline (10 mM sodium phosphate, 150 mM NaCl, pH 7.4).
RT: room temperature.
SMB: sodium metabisulfite.
T: Triton X-100.
TB: 10 mM Tris-HCl, pH 7.4.
TBS: Tris-buffered saline (20 mM Tris-HCl, 150 mM NaCl, pH 7.4).