Table 3.
ROSE outlier genes/probe sets used for clustering and definition of unique ROSE cluster groups
| R1 |
R2 |
R3 |
R4 |
R5 |
R6 |
R7 |
R8 |
||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Probe set | Gene symbol | Probe set | Gene symbol | Probe set | Gene symbol | Probe set | Gene symbol | Probe set | Gene symbol | Probe set | Gene symbol | Probe set | Gene symbol | Probe set | Gene symbol |
| 220416_at | ATP8B4 | 227441_s_at | ANKS1B | 213808_at | ADAM23* | 203949_at | MPO | 212062_at | ATP9A | 242457_at | — | 219837_s_at | CYTL1 | 229975_at | BMPR1B |
| 219463_at | C20orf103 | 227440_at | ANKS1B | 203865_s_at | ADARB1 | 203948_s_at | MPO | 228297_at | CNN3* | 241535_at | — | 212192_at | KCTD12 | 208303_s_at | CRLF2 |
| 205899_at | CCNA1 | 227439_at | ANKS1B | 230128_at | IGL@ | 202273_at | PDGFRB | 209604_s_at | GATA3 | 204066_s_at | AGAP1 | 238689_at | GPR110 | ||
| 209101_at | CTGF | 243533_x_at | ANKS1B* | 231513_at | KCNJ2* | 203476_at | TPBG | 213362_at | PTPRD | 240758_at | AGAP1* | 235988_at | GPR110 | ||
| 218468_s_at | GREM1 | 234261_at | ANKS1B* | 203726_s_at | LAMA3 | 229661_at | SALL4 | 233225_at | AGAP1* | 236489_at | GPR110 | ||||
| 213150_at | HOXA10 | 202207_at | ARL4C | 232914_s_at | SYTL2 | 213258_at | TFPI | 219470_x_at | CCNJ | 207651_at | GPR171 | ||||
| 235521_at | HOXA3 | 202206_at | ARL4C | 225496_s_at | SYTL2 | 210665_at | TFPI | 203921_at | CHST2 | 212592_at | IGJ | ||||
| 213844_at | HOXA5 | 212077_at | CALD1 | 210664_s_at | TFPI | 206756_at | CHST7 | 213371_at | LDB3 | ||||||
| 214651_s_at | HOXA9 | 223786_at | CHST6 | 1552398_a_at | CLEC12A/B | 217110_s_at | MUC4 | ||||||||
| 209905_at | HOXA9 | 205489_at | CRYM | 231166_at | GPR155 | 217109_at | MUC4 | ||||||||
| 218847_at | IGF2BP2 | 206070_s_at | EPHA3 | 202409_at | IGF2 | 204895_x_at | MUC4 | ||||||||
| 201105_at | LGALS1 | 201579_at | FAT1 | 215177_s_at | ITGA6 | ||||||||||
| 1557534_at | LOC339862 | 231455_at | FLJ42418 | 201656_at | ITGA6 | ||||||||||
| 202890_at | MAP7 | 239657_x_at | FOXO6 | 211340_s_at | MCAM | ||||||||||
| 242172_at | MEIS1 | 235666_at | ITGA8? | 210869_s_at | MCAM | ||||||||||
| 204069_at | MEIS1 | 235911_at | K03200* | 215692_s_at | MPPED2 | ||||||||||
| 1559477_s_at | MEIS1 | 213005_s_at | KANK1 | 205413_at | MPPED2 | ||||||||||
| 204304_s_at | PROM1 | 208567_s_at | KCNJ12 | 202336_s_at | PAM | ||||||||||
| 202976_s_at | RHOBTB3 | 210150_s_at | LAMA5 | 228863_at | PCDH17 | ||||||||||
| 232231_at | RUNX2 | 228262_at | MAP7D2 | 227289_at | PCDH17 | ||||||||||
| 226415_at | VAT1L | 206028_s_at | MERTK | 205656_at | PCDH17 | ||||||||||
| 231899_at | ZC3H12C | 204114_at | NID2 | 230537_at | PCDH17 | ||||||||||
| 212151_at | PBX1 | 203335_at | PHYH | ||||||||||||
| 212148_at | PBX1 | 203329_at | PTPRM | ||||||||||||
| 205253_at | PBX1 | 1555579_s_at | PTPRM | ||||||||||||
| 227949_at | PHACTR3 | 220059_at | STAP1 | ||||||||||||
| 202178_at | PRKCZ | 1554343_a_at | STAP1 | ||||||||||||
| 242385_at | RORB | ||||||||||||||
| 231040_at | RORB? | ||||||||||||||
| 46665_at | SEMA4C | ||||||||||||||
| 206181_at | SLAMF1 | ||||||||||||||
| 225483_at | VPS26B | ||||||||||||||