Fig. 3.

Detected proteins in the Ydl156w-TAP and their functional classifications. A, Gene Ontology classes (“biological process”) significantly overrepresented (in percent, as measured by GOstat (20)) in the Ydl156w purifications. All six biological replicates were used for GO analysis, however, for visualization purposes we only represented the top 20 overrepresented (by percentage) categories of “biological processes.” B, An interaction network that depicts the Ydl156w associated proteins identified by MudPIT. Proteins identified in at least three biological replicates are depicted in (B) and used to create a network of Ydl156w associations using Cytoscape (56, 57).