Table I. Top-Ranking HIV-1 Rev Binding DEAD/H Box Proteins.
Rank | Gene name | PCA score | Comparisona |
---|---|---|---|
1 | DHX36 | 0.097 | NX vs NX+RRE |
2 | DDX24 | 0.092 | NX vs NX+RanGTP |
DDX24 | 0.068 | NX vs NX+RRE | |
3 | DDX3X | 0.070 | NX vs NX+RRE |
DDX3X | 0.050 | NX+RanGTP vs NX+RanGTP+RRE | |
4 | DDX1 | 0.052 | NX+RanGTP vs NX+RanGTP+RRE |
DDX1 | 0.038 | NX+RRE vs NX+RRE+RanGTP | |
5 | DDX17 | 0.049 | NX vs NX+RRE |
DDX17 | 0.040 | NX+RanGTP vs NX+RanGTP+RRE | |
6 | DHX9 | 0.048 | NX vs NX+RRE |
7 | DDX47 | 0.043 | NX+RanGTP vs NX+RanGTP+RRE |
DDX47 | 0.040 | NX vs NX+RRE | |
8 | DDX5 | 0.040 | NX vs NX+RRE |
a Abundance of DEAD/H Box proteins is increased in second condition. Some proteins have PCA scores above the cutoff for two different comparisons (as shown). NX: nuclear extract.