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. 2012 Feb 3;287(14):10922–10932. doi: 10.1074/jbc.M111.333393

TABLE 1.

Tumbling properties of free and connected B. stearothermophilus IF2-C1 and IF2-C2 domains

For isolated and connected IF2-C1 and -C2 domains, NMR relaxation data were analyzed by Modelfree analysis. Extracted rotational correlation times and diffusion tensors were compared with predictions based on structure models.

Domain C1 C1-C2a C1-C2b C2
Rotational correlation times τc (ns)
    Predictedc 5.19 18.4 18.4 6.95
    Experimental 9.02 ± 0.04 11.59 ± 0.07 11.44 ± 0.05 7.34 ± 0.03

Rotational diffusion tensor axis length ratios
    Predictedc,d
    Dxx/Dzz 0.94 0.40 0.40 0.75
    Dyy/Dzz 0.98 0.40 0.40 0.83
    Experimentale
    Dxx/Dzz 0.73 ± 0.02 0.85 ± 0.03 0.84 ± 0.02 0.80 ± 0.02

a Domain C1 is considered when connected to domain C2.

b Domain C2 is considered when connected to domain C1.

c Predictions were done with HYDRONMR on lowest energy NMR structures of isolated IF2-C1 and IF2-C2 and on the homology model of connected IF2 C1-C2.

d Assumed is: Dzz > DyyDxx.

e Model-free analyses were performed with FAST-Modelfree assuming axial symmetry (Dxx = Dyy, hence η = 0).