Table 1. Analysis of GO data: cellular localization of intersection nodes.
GO term* | Number of nodes | Overexpression (p-value)** |
1. Cytoskeleton | 31 | |
Intermediate filament | 11 | 1.17E-4 |
2. Extracellular space | 24 | |
Plasma lipoprotein particle | 5 | 7.08E-6 |
3. Nucleus | 52 | |
Histone acetyltransferase complex | 5 | 2.70E-6 |
4. Plasma membrane | 64 | |
Basolateral plasma membrane | 9 | 3.18E-5 |
Focal adhesion | 7 | 1.11E-6 |
Integrin complex | 9 | 1.73E-9 |
5. Vesicle | 24 | |
Cytoplasmic membrane-bounded vesicle | 23 | 6.26E-9 |
Pigment granule | 8 | 6.57E-5 |
Secretory granule | 12 | 6.97E-9 |
GO terms follow the GO Consortium hierarchy. Higher level (generic) terms are numbered and in bold text, lower level (specific) terms are in regular text.
The cut-off value was set to 1E-4.