Table V.
Prediction of InsEnds in CASP8 structures (postdiction)
| Local InsEnds RMSD to native (align InsEnds, RMSD of InsEnds) | Global InsEnds RMSD to native (align non InsEnds, RMSD of InsEnds) | Global protein RMSD to native (align all, RMSD of all) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| CASP8 target | InsEnds length | RMSD of InsEnds region | Initial model (RAPTOR + Modeler) | InsEnds best | InsEnds predicted | Initial model (RAPTOR + Modeler) | InsEnds best | InsEnds predicted | Initial model (RAPTOR + modeler) | InsEnds best | InsEnds predicted |
| T0431D1 | 11 | 5.21 | 0.22 | 0.52 | 0.91 | 5.34 | 4.14 | 4.7 | 4.76 | 4.04 | 4.81 |
| T0456D2 | 12 | 2.09 | 0.49 | 0.47 | 0.47 | 1.44 | 1.22 | 2.03 | 2.04 | 2.12 | 2.16 |
| T0478D1 | 12 | 8.07 | 2.9 | 1.58 | 3.05 | 12.2 | 8.4 | 11.8 | 8.26 | 8.21 | 8.31 |
| T0443D1 | 12 | 3.42 | 4.04 | 3.7 | 3.48 | 11.13 | 7.3 | 7.67 | 5.33 | 4.42 | 4.62 |
| T0411D1 | 11 | 2.74 | 3.53 | 1.85 | 3.53 | 10.2 | 2.78 | 4.98 | 3.87 | 2.85 | 3.11 |
| T0479D1 | 11 | 1.54 | 0.75 | 0.48 | 0.97 | 2.3 | 1.59 | 1.69 | 1.62 | 1.59 | 1.59 |