Table 3.
Signal transduction genes with significant (P<0.01) differential expression (≥2.0-fold)
| Contig ID | Accession No. | Annotation | Fold difference |
||||
| C33 vs. C26 | Spd26 vs. C26 | Spd33 vs. C26 | Spd33 vs. C33 | Spd33 vs. Spd26 | |||
| Affx.57054.2.A1_at | AI487567 | Calcium-binding EF hand family protein | 2.10 | −1.05 | 3.10 | 1.48 | 2.37 |
| Affx.16164.1.S1_at | CN385704 | Calcium-binding EF hand family protein | 2.73 | −1.02 | 2.73 | 1.00 | 3.81 |
| Affx.57454.1.S1_at | BI923132 | Calmodulin | 2.17 | −1.29 | 2.94 | 1.35 | 2.57 |
| Affx.70732.1.S1_at | AI897832 | Calmodulin-related protein | 11.77 | −1.29 | 3.21 | −3.67 | 1.18 |
| Affx.9367.1.S1_at | CN385420 | Ca2+-binding protein 1 | 4.65 | 1.27 | 1.98 | −2.35 | 2.16 |
| Affx.66814.1.S1_at | AW621230 | Calmodulin binding | 2.02 | −1.14 | 2.64 | 1.31 | 1.94 |
| Affx.66436.1.S1_at | AW040280 | Calcium binding protein | 3.24 | −1.11 | 3.30 | 1.02 | 4.47 |
| Affx.50750.1.A1_at | AI771837 | MYB1 | 2.25 | 1.16 | 3.49 | 1.55 | 2.35 |
| Affx.53591.1.S1_at | AI899018 | MYB domain protein 107 | −4.78 | −1.22 | −3.01 | 1.59 | −2.36 |
| Les.5017.1.S1_at | BT013110.1 | MYB domain protein 111 | 1.40 | 1.15 | 2.19 | 1.07 | 1.77 |
| Les.2084.1.S1_at | BF097539 | NAC domain protein | 1.54 | 1.08 | 2.20 | 1.44 | 1.91 |
| Les.4483.1.S1_at | AY498713.1 | NAC domain protein | 2.16 | −1.04 | 1.63 | −1.33 | 1.36 |
| Affx.37343.1.A1 at | AI488497 | NAC domain protein | 2.51 | 1.06 | 3.02 | 1.20 | 1.83 |
| Les.2667.3.S1_at | BE433811 | WRKY-type transcription factor 2 | 2.62 | −1.12 | 2.89 | 1.11 | 2.11 |
| Les.3964.1.S1_at | AY157060.1 | WRKY transcription factor IId-2 | −3.73 | 1.10 | −2.45 | 1.52 | −1.78 |
| Affx.64823.1.S1_at | AI778204 | Zinc finger like protein | 2.23 | 1.49 | 4.30 | 1.93 | 4.50 |
| Affx.68645.1.S1_at | BM411685 | Zinc finger protein | 1.23 | 1.05 | 2.10 | 1.71 | 2.01 |
| Affx.30683.1.S1_at | AI486655 | Zinc finger protein | 3.02 | −1.16 | 3.25 | 1.08 | 2.82 |
| Affx.70855.1.S1_at | AW220130 | Zinc finger protein | 1.01 | −1.03 | 2.03 | 2.71 | 1.93 |
| Affx.35255.1.S1_at | AW623792 | Zinc finger protein 1 | 2.21 | −1.29 | 2.14 | −1.03 | 1.67 |
| Les.5126.1.S1_at | BT013336.1 | Zinc finger protein | −1.16 | −1.07 | 2.17 | 2.52 | 2.30 |
| Affx.71311.1.S1_at | CN384672 | Zinc finger (C2H2 type) family protein | 2.53 | 1.02 | 3.78 | 1.49 | 2.76 |
| Les.5244.1.S1_at | BT013559.1 | Zinc finger (DHHC type) family protein | 2.74 | −1.01 | −1.05 | −2.89 | −1.28 |
| Les.1287.2.S1_at | AW621773 | Zinc finger (DHHC type) family protein | 2.99 | 1.17 | 3.00 | 1.01 | 3.77 |
| Les.1287.1.A1_at | BG630588 | Zinc finger (DHHC type) family protein | 2.64 | 1.05 | 2.37 | −1.11 | 2.43 |
| Affx.30683.2.S1_at | AI897122 | Zinc finger (C3HC4 type) family protein | 3.12 | −1.12 | 3.13 | 1.00 | 2.62 |
| Affx.53941.1.S1_at | BF176552 | Zinc finger (C3HC4 type) family protein | 4.10 | −1.01 | 3.48 | −1.18 | 2.12 |
| Affx.3163.2.S1_at | BM412856 | Zinc finger (AN1-like) family protein | 1.68 | −1.02 | 2.22 | 1.32 | 2.49 |
| Les.3549.1.S1_at | AF096252.1 | Ethylene-responsive catalase | 1.71 | −1.28 | 2.58 | −1.22 | 1.29 |
| Les.4102.1.S1_at | AY192368.1 | Ethylene response factor 2 | 1.68 | 1.24 | 2.19 | 1.30 | 2.21 |
| Les.4139.1.S1_at | AY192370.1 | Ethylene response factor 4 | 1.57 | 1.13 | 2.05 | 1.31 | 1.00 |
| Les.271.1.S1_at | CN384665 | Ethylene-responsive methionine synthase | −1.76 | 1.23 | −2.00 | −1.13 | −2.43 |
| Les.3465.1.S1_at | AY079426.1 | Ethylene receptor-like protein | −2.66 | −1.37 | −2.43 | 1.09 | −2.20 |
| Les.3766.1.S1_at | U77719.1 | Ethylene-responsive late embryogenesis-like protein | −7.48 | −1.06 | −4.21 | 1.78 | −1.44 |
| Affx.16424.1.A1_at | AI487449 | Mitogen-activated protein kinase 3 | −1.04 | 1.10 | 2.11 | 2.17 | 2.13 |
| Affx.26003.1.S1_at | CK715553 | Serine/threonine-protein kinase | 2.22 | 1.09 | −1.20 | −1.13 | −1.12 |