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. 2012 Apr 11;7(4):e35015. doi: 10.1371/journal.pone.0035015

Table 3. SNP genotyping results in SAPHIR (n = 1,726) and NBS (n = 1,832).

SLC11A2 TMPRSS6
Genotype rs6580779 rs161044 rs150909 rs149411 rs11704654 rs4820268 rs855791
0 88.1/88.7% 88.0/88.7% 88.0/88.7% 34.9/38.1% 66.4/66.2% 30.2/27.1% 33.0/29.1%
1 11.6/10.7% 11.7/10.7% 11.7/10.7% 49.3/46.5% 29.8/30.1% 48.9/51.5% 48.0/50.8%
2 0.3/0.6% 0.3/0.6% 0.3/0.6% 15.7/15.4% 3.9/3.7% 20.9/21.4% 19.0/20.1%
MAF 6.1/6.0% 6.1/6.0% 6.1/6.0% 40.4/38.7% 18.8/18.7% 45.4/47.2% 43.0/45.5%
CR 99.2/99.9% 99.7/99.9% 99.7/99.9% 99.5/99.9% 99.7/95.6% 98.8/99.7% 98.7/100%
HWE 0.348/0.089 0.539/0.089 0.538/0.089 0.311/0.431 0.313/0.638 0.552/0.159 0.408/0.323

Notes:

The coding of genotypes is indicated in Table 2. SAPHIR data are indicated on the left side of the slash, and NBS data are given on the right side of the slash.

MAF… minor allele frequency.

CR… call rate (genotyping success rate).

HWE… p-value for test for Hardy-Weinberg-Equilibrium.