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. 2012 Apr 11;7(4):e34615. doi: 10.1371/journal.pone.0034615

Table 1. Studies on global DNA hypomethylation in peripheral blood leukocytes and cancer risk included in the meta-analysis.

Author (Year) Methods Cancer site Country Study period No. cases/controls Category OR (95% CI) P trend Confounding variables that were considered
Case-control studies
Pufulete Methyl Colorectal UK 2000 76/ T1 (Adenoma) 1 0.01 Age, sex, body mass index,
(2003)(36) acceptance −2001 (35 adenoma T2 6.68 (0.99–45.12) smoking status, and alcohol
assay and 28 cancer) T3 10.27 (2.05–51.46) intake
T1 (Cancer) 1 0.08
T2 2.98 (0.51–17.40)
T3 4.90 (0.84–28.53)
Hsiung LINE-1 HNSCC USA 1999 278/526 T3 (>76.9) 1 0.03 Age, sex, race, smoking
(2007) (37) (LRE1) −2003 T2 (73.6-0.76.9) 1.3 (0.9–2.0) history, lifetime average
T1 (<73.6) 1.6 (1.1–2.4) alcoholic drinks weekly,
and positive HPV16 serology
LIM %5-mC Colorectal USA 2000 115/115 T3 (5.43–6.42) 1 0.002 Matching factors (age and
(2008) (38) Adenoma −2002 T2 (5.29–5.43) 0.39 (0.66–2.94) month of blood draw),
T1 (2.76–5.29) 5.88 (2.04–16.67) smoking history, and red
meat intake
Moore %5-mC Bladder Spain 1998 775/397 Q4 (≥3.68) 1 <0.001 Age, sex, region, smoking
(2008) (39) −2001 Q3 (3.19–3.68) 2.05 (1.37–3.06) status, pack-years, interaction
Q2 (2.46–3.19) 1.62 (1.07–2.44) (smoking status, pack-year)
Q1 (<2.46) 2.67 (1.77–4.03)
Choi %5-mC Breast USA 179/180 T3 1 <0.001 Age, race, and batches
(2009) (40) T2 1.49 (0.84–2.65)
T1 2.86 (1.65–4.94)
Hou LINE-1, Gastric Poland 1994 302/421 T3 (81.7–90.4) 1 0.12 Age, sex, educational level,
(2010) (41) Alu −1996 T2 (78.6–81.7) 1.2 (0.8–1.8) smoking, and alcohol
T1 (67.6–78.6) 1.4 (0.9–2.0)
Wilhelm LINE-1 Bladder USA 1994 285/465 74.25–91.96 (90%) 1 Age and sex
(2010) (42) −1998 57.89-74.25 (10%) 1.8 (1.12–2.90)
Cash LINE-1 Bladder China 1995 510/528 T3 (≥82.52) 1 0.268 Age at reference date, sex,
(2011) (43) −1998 T2 (81.22–82.52) 1.10 (0.81–1.50) and family history of cancer
T1 (<81.22) 1.28 (0.95–1.73)
Liao(44) LINE-1 Renal cell Central 1999 328/654 Q4 (86.0–90.2) 1 0.004 Age, sex, center, smoking status
(2011) and −2003 Q3 (81.7–83.0) 0.58 (0.38–0.90) BMI, high blood pressure, and
Eastern Q2 (80.3–81.7) 0.54 (0.36–0.83) vegetable intake
Europe Q1 (78.4–83.6) 0.49 (0.32–0.75)
Nested case-control study
Gao(45) LINE-1, Stomach China 1997 192/384 Q4 1 Age
(2011) Alu −2009 Q3 0.73 (0.44–1.21)
Q2 1.02 (0.64–1.60)
Q1 0.89 (0.54–1.46)
Cohort studies Incidence/total
Zhu LINE-1, All USA 1963 29/517 High (86.2-77.2) 1 Age, BMI, race, education,
(2011) (46) Alu −1999 Low (77.1-68.1) 3.0 (1.3–6.9) smoking status, pack-years,
and alcohol drinking

OR (95% CI) was recalculated because the reference was the lowest tertile of genomic methylation in the original result.

T: tertile, Q: quartile, %5-mC: percentage of 5-methyl cytosine, LINE-1: long interspersed nucleotide element 1, LRE1: LINE retrotransposable element 1.