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. Author manuscript; available in PMC: 2013 Mar 2.
Published in final edited form as: J Proteome Res. 2012 Feb 21;11(3):1633–1643. doi: 10.1021/pr2008384

Table 1.

Ethanol consumption and SIRT3 ablation reveals numerous targets of mitochondrial protein acetylation.

Protein ID Accession
#
WT
Cont
WT
EtOH
KO
Cont
KO
EtOH
Biological Process

Ornithine aminotransferase P29758 0 1 1 2 Amino Acid Biosynthesis
ATP synthase subunit alpha Q03265 0 1 0 5 ATP Biosynthesis
NADH dehydrogenase (ubiquinone) 1 alpha Q99LC3 0 1 1 1 Electron Transport Chain
Calreticulin P14211 0 0 0 1 Protein Folding
Stress-70 protein P38647 1 1 1 1 Protein Folding
Heat shock cognate 71 kDa protein P63017 1 1 1 1 Stress Response/Protein Folding
Hypoxia up-regulated protein 1 Q9JKR6 0 1 1 1 Stress Response/Protein Folding
Electron transfer flavoprotein subunit alpha Q99LC5 0 2 1 4 Electron Transport Chain
Electron transfer flavoprotein subunit beta Q9DCW4 0 3 2 3 Electron Transport Chain
Beta-lactamase-like protein 2 Q99KR3 0 1 0 1 Not reported
Valacyclovir hydrolase Q8R164 0 0 0 1 Not reported
Peroxisomal coenzyme A diphosphatase Q99P30 0 3 0 3 Acetyl-CoA Catabolic Process
3-hydroxyisobutyryl-CoA hydrolase Q8QZS1 1 1 1 1 Amino Acid Catabolism
Fumarylacetoacetase P35505 0 1 1 1 Amino Acid Catabolism
Epoxide Hydrolase 2 P34914 1 1 1 1 Aromatic Hydrocarbon Catabolism
ATP synthase subunit beta P56480 1 1 1 3 ATP Biosynthesis
Acyl coenzyme A thioesterase 13 Q9CQR4 0 1 1 1 Fatty Acid Metabolism/Lipid Metabolism
Bile acid-CoA:amino acid N-acyltransferase Q91X34 0 1 1 1 Fatty Acid Metabolism/Lipid Metabolism
Fructose-1,6-bisphosphatase 1 Q9QXD6 0 1 1 1 Gluconeogenesis
Cathepsin B P10605 0 0 0 1 Regulation of Catalytic Activity
ATP synthase subunit d Q9DCX2 2 2 2 2 ATP Biosynthesis
Delta (3,5)-Delta (2,4)-dienoyl-CoA isomerase O35459 1 1 1 2 Fatty Acid Metabolism/Lipid Metabolism
Alpha-methylacyl-CoA racemase O09174 1 1 1 1 Isoprenoid Catabolic Process
Adenylate kinase 2 Q9WTP6 0 1 1 2 ATP Biosynthesis
Acyl-CoA synthetase family member 2 Q8VCW8 0 0 0 2 Fatty Acid Metabolism/Lipid Metabolism
Propionyl-CoA carboxylase alpha chain Q91ZA3 0 0 0 1 Fatty Acid Metabolism/Lipid Metabolism
Pyruvate carboxylase Q05920 1 2 1 3 Gluconeogenesis/Lipid Metabolism
Succinyl-CoA ligase [ADP-forming] subunit beta Q9Z219 0 1 1 1 Proteolysis
Succinyl-CoA ligase [GDP-forming] subunit beta Q9Z218 0 1 1 1 Proteolysis
Carbamoyl phosphate synthase Q8C196 1 2 1 3 Urea Cycle
Arginosuccinate sythase P16460 0 1 1 1 Urea Cycle/Amino Acid Biosynthesis
Citrate Lyase subunit beta-like protein Q8R4N0 1 1 1 1 Cellular Aromatic Compound Metabolic Process
2-hydroxyacyl-CoA lyase 1 Q9QXE0 1 1 1 2 Fatty Acid Metabolism
Enoyl-CoA hydratase Q8BH95 0 1 0 1 Fatty Acid Metabolism/Lipid Metabolism
Enoyl-CoA hydratase domain-containing protein 2 Q3TLP5 0 1 1 1 Fatty Acid Metabolism/Lipid Metabolism
Glutamine synthetase P15105 0 1 1 1 Glutamine Biosynthetic Process
Carbonic anhydrase 3 P16015 0 2 2 2 One-Carbon Metabolic Process
Aconitase hydratase Q99KI0 0 0 0 2 TCA Cycle
Cytochrome b-c1 complex subunit 1 Q9CZ13 1 2 2 3 Electron Transport/Respiratory Chain
Myelin basic protein P04370 1 2 1 2 Myelination
2-oxoisovalerate dehydrogenase subunit beta Q6P3A8 0 1 0 1 Amino Acid Catabolism
4-hydroxyphenylpyruvate dioxygenase P49429 1 1 1 1 Amino Acid Catabolism
Dimethylglycine dehydrogenase Q9DBT9 2 2 2 2 Amino Acid Catabolism/Oxidation-Reduction
Sarcosine dehydrogenase Q99LB7 1 1 1 2 Amino Acid Catabolism/Oxidation-Reduction
Superoxide dismutase [Mn] P09671 1 1 1 1 Antioxidant
Glutamate dehydrogenase 1 P26443 3 3 3 4 Cellular Amino Acid Metabolism
NADH-cytochrome b5 reductase 3 Q9DCN2 0 1 1 1 Cholesterol Biosynthesis/Lipid Metabolism
Dihydrolipoyl dehydrogenase O08749 1 1 1 1 Electron Transport
Cytochrome b-c1 complex subunit Rieske Q9CR68 0 0 0 1 Electron Transport Chain
Electron transfer flavoprotein-ubiquinone oxidoreductase Q921G7 0 0 0 1 Electron Transport Chain
Succinate dehydrogenase [ubiquinone] flavoprotein Q8K2B3 0 1 0 1 Electron Transport Chain/TCA Cycle
NADH dehydrogenase [ubiquinone] flavoprotein 2 Q9D6J6 0 1 0 1 Electron Transport/Respiratory Chain
Hydroxyacyl-coenzyme A dehydrogenase Q61425 1 2 1 2 Fatty Acid Metabolism/Lipid Metabolism
Long-chain specific acyl-CoA dehydrogenase P51174 1 2 2 2 Fatty Acid Metabolism/Lipid Metabolism
Medium-chain specific acyl-CoA dehydrogenase P45952 4 4 4 4 Fatty Acid Metabolism/Lipid Metabolism
Peroxisomal acyl-coenzyme A oxidase Q9R0H0 1 3 2 5 Fatty Acid Metabolism/Lipid Metabolism
Short-chain specific acyl-CoA dehydrogenase Q07417 2 2 2 2 Fatty Acid Metabolism/Lipid Metabolism
Glycerol-2-phosphate dehydrogenase P13707 0 1 1 1 Gluconeogenesis
Pyruvate dehydrogenase E1 component subunit beta Q9D051 1 1 1 1 Glycolysis
Coproporphyrinogen-III oxidase P36552 1 1 1 1 Heme Biosynthesis/Porphyrin Biosynthesis
Aldehyde dehydrogenase P47738 4 5 5 6 Oxidation-Reduction Process
Alpha-aminoadipic semialdehyde dehydrogenase Q9DBF1 1 1 1 2 Oxidation-Reduction Process
Delta-1-pyrroline-5-carboxylate dehydrogenase Q8CHT0 0 1 1 2 Oxidation-Reduction Process
Hydroxyacid-oxoacid transhydrogenase Q8R0N6 1 1 1 1 Oxidation-Reduction Process
Isovaleryl-CoA dehydrogenase Q9JHI5 1 1 1 1 Oxidation-Reduction Process
Methylmalonate-semialdehyde dehydrogenase Q9EQ20 1 1 1 1 Oxidation-Reduction Process
Uricase P25688 3 4 4 6 Purine Metabolism
Isocitrate dehydrogenase [NAD] subunit apha Q9D6R2 1 1 1 1 TCA Cycle
Malate dehydrogenase P14152 1 1 1 1 TCA Cycle
Isocitrate dehydrogenase [NADP] P54071 2 2 2 2 TCA Cycle/Stress Response
Dihydropteridine reductase Q8BVI4 0 1 1 1 Tetrahydrobiopterin Biosynthesis
Peroxisomal bifunctional enzyme Q9DBM2 0 1 1 1 Fatty Acid Metabolism/Lipid Metabolism
Peroxisomal multifunctional enzyme type 2 P51660 1 1 2 2 Fatty Acid Metabolism/Lipid Metabolism
Trifunctional enzyme subunit alpha Q8BMS1 0 1 1 1 Fatty Acid Metabolism/Lipid Metabolism
Catalase P24270 0 1 0 5 Antioxidant
Glutathione peroxidase 1 P11352 0 1 1 1 Antioxidant
Peroxiredoxin-1 P35700 0 0 0 2 Antioxidant
Voltage-dependent anion-selective channel protein 1 Q60932 1 2 2 2 Ion Transport
Betaine homocysteine S-methyltransferase O35490 2 5 2 5 Amino Acid Biosynthesis
Ornithine carbamoyltransferase P11725 2 2 2 2 Amino Acid Biosynthesis
Glutathione S-transferase Mu 1 P10649 0 1 0 2 Antioxidant
Hydroxymethylglutaryl-CoA synthase P54869 1 3 2 6 Cholesterol Biosynthesis/Lipid Metabolism
3-ketoacyl-CoA thiolase Q8BWT1 6 6 6 6 Fatty Acid Metabolism/Lipid Metabolism
Acetyl-CoA acetyltransferase Q8QZT1 6 6 6 6 Ketone Body Metabolism
Aspartate aminotransferase P05202 1 1 1 1 Lipid Transport
non-specific lipid-transfer protein P32020 0 2 2 4 Lipid Transport
4-aminobutyrate aminotransferase P61922 0 0 0 1 Neurotransmitter Catabolic Process
3-Mercaptopyruvate sulfurtransferase Q99J99 1 1 1 1 Sulfate Transport
Thiosulfate sulfurtransferase P52196 0 0 0 1 Sulfate Transport
Citrate synthase Q9CZU6 1 1 1 1 TCA Cycle

72 128 107 177