Table 5.

Posterior inferences results on replicated datasets (100 replicates), using the same SQI threshold of 0.50 for all scenarios of analysis

	LG 1	LG 2	LG 3	LG 4	LG 5
Simulation
Position	22.0	44.0	66.0	88.0
Effect	1.30	1.10	0.90	0.70
Segregationa	82	92	88	87	n.r.
UNR
Powerb	66	63	29	21	2e
Locationc	22.4 (7.7)	44.9 (17.0)	64.3 (14.3)	78.5 (30.2)
Effectd	1.40 (0.23)	1.16 (0.29)	1.27 (0.31)	1.22 (0.46)
TIBD
Power	73	77	56	43	1e
Location	22.0 (4.8)	42.3 (7.4)	64.4 (11.2)	80.6 (19.1)
Effect	1.31 (0.21)	1.11 (0.21)	1.01 (0.29)	0.89 (0.31)
LAAM
Power	73	77	56	43	1e
Location	21.8 (4.1)	42.1 (7.8)	63.6 (11.2)	80.4 (22.2)
Effect	1.30 (0.20)	1.12 (0.18)	1.02 (0.29)	0.89 (0.28)

^aNumber of replicates with QTL segregation

^bSignificance threshold: SQI (summed QTL intensity) >0.50

^cMean (standard deviation) of the estimated posterior mode of QTL location

^dMean (standard deviation) of the estimated QTL effect at posterior mode of QTL location

^eType I error as no QTL was simulated on Linkage Group 5