Table II. QTL detected for male-mediated nonrandom mating (MNRM) and female and male seed yield (FSY, MSY) traits.
Associated Marker, Position refers to the closest marker associated with the QTL, as well as the QTL peak. CI refers to the 2-LOD confidence interval (in cM), as well as the associated markers. For additive effect, when numbers are positive, then Col alleles increase the trait. When numbers are negative, then Ler alleles increase the trait. Variance refers to the percentage of variance explained by the QTL. Asterisk, Not significant by GLM.
| Trait | Chromosome | Associated Marker, Position (cM) | CI (cM) | LOD | Additive Effect (P = ) | Variance |
| qFSY1 | 2 | er, 43.7 | 40.7-61.2 (GPA1-LTP) | 3.59 | −2.21 (0.01) | 12.1 |
| qFSY2 | 4 | app, 13.3 | 6.88-23.7 (g3843- mi167) | 4.11 | −2.65 (0.0015) | 16.9 |
| qFSY3 | 5 | 06569, 10.7 | 10.6-14.3 (mi121-mi97) | 3.36 | −1.21 (0.138)* | 2.1 |
| qMSY1 | 4 | AG, 57.7 | 50.2-68.6 (mi260-mi123) | 2.9 | 2.52 (0.0031) | 6.8 |
| qMNRM1 | 1 | Tag1, 111.9 | 109.3-114.0 g4552-mi103 | 19.2 | 0.14 (<0.000) | 66.9 |
| qMNRM2 | 5 | g2368, 137.5 | 120.4-141.5 (emb514-CATHHANK) | 3.17 | 0.046 (<0.000) | 5.3 |