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. 2011 Mar 17;19(Suppl 1):S6–S44. doi: 10.1038/ejhg.2010.249

Box 3. Quantitative measures.

Penetrance of a genetic variant
 Probability that traits or characteristics associated with that variant will manifest (within a specified period of time)
 
Incidence
 Number of new cases of disease occurring in a population (within a specified period of time)
 
Prevalence
 Proportion of affected individuals in a population (at a given moment of time)=incidence rate × average duration of disease
 
Sensitivity or detection rate (DR)
 Proportion of affected individuals (or those who become affected within a specified period of time) with a positive (unfavorable) screening test result
 
Specificity
 Proportion of unaffected individuals with a negative screening test result
 
False-positive rate
 Proportion of unaffected individuals with a positive screening test result=1−specificity
 
DR5
 Detection rate for a 5% false-positive rate
 
Positive predictive value (PPV)
 Risk of disease among individuals with risk factor (with positive screening test result) (clinical impact)
 
Population attributable fraction (PAF)
 Proportion of cases that could be prevented if the risk factor was absent (the public health impact)
 
ROQ1−5
 Relative odds of the highest fifth of the risk factor distribution compared with people in the lowest fifth
 
Number needed to treat (NNT)
 Number of people needed to treat for one success
 
Number needed to screen (NNS)
 Number of individuals needed to screen to prevent one case of disease (measure to assess the performance of screening, combining penetrance and frequency with reduction in risk of disease)=inverse of the frequency divided by the penetrance divided by the reduction in risk of disease=(1/F × p × RR)

Source: Based on Stewart et al,41 Wald et al,91 Khoury and Wagener,78 Vineis et al.77