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. 2012 Apr 16;7(4):e34955. doi: 10.1371/journal.pone.0034955

Table 1. Genetic diversity measures estimated using 14 microsatellite loci in each of 20 Paeonia rockii populations.

Population n A AR[10] HO HE FIS a IAMb SMMb
BHC 6 1.93 1.81 0.25 0.319 0.236 0.064 0.18
BHP 6 3.29 2.71 0.469 0.391 −0.227 0.055 0.151
DC 25 5.29 2.86 0.493 0.554 0.116 0.38 0.999
DS 22 4.29 2.6 0.38 0.494 0.235 0.38 0.979
GQ 29 3.71 2.64 0.543 0.519 −0.046 0.002** 0.768
HS 26 3.21 2.13 0.347 0.395 0.122 0.428 0.979
JFM 4 3.43 - 0.673 0.691 0.03 - -
JL 27 6.64 3.58 0.543 0.667 0.189 0.010* 0.979
KZV 13 4.64 3.16 0.509 0.609 0.17 0.052 0.866
LC 12 2.71 2.43 0.507 0.434 −0.178 0.001** 0.055
LD 24 4.21 2.6 0.476 0.533 0.11 0.034 0.709
LY 3 2.07 - 0.333 0.41 0.222 - -
MY 24 5.36 3.12 0.616 0.642 0.041 0.001*** 0.749
NX 24 4.07 2.48 0.552 0.512 −0.068 0.148 0.955
TC 2 1.43 - 0.286 0.274 −0.067 - -
TM 3 1.86 - 0.381 0.352 −0.103 - -
WX 30 5.14 2.77 0.538 0.566 0.051 0.047* 0.905
YP 26 4.79 2.62 0.508 0.515 0.014 0.665 1
YS 3 2.29 - 0.393 0.488 0.241 - -
ZX 26 3.43 2.29 0.384 0.471 0.188 0.086 0.787
Average 16.75 3.69 2.65 0.459 0.492

Note: n, sample size; A, number of alleles per locus; AR [10], mean within-population allelic richness for a standardized sample size of ten gene copies; HO, observed heterozygosity; HE, unbiased expected heterozygosity; FIS, fixation index. Sequential Bonferroni correction was used to determine significance levels in multiple tests.

a

Deviations of FIS from 0 in each population were evaluated by permutation tests.

b

Probabilities associated with Wilcoxon's signed-rank tests (one-tailed) for HE>HEQ, where HEQ is the heterozygosity expected at mutation-drift equilibrium under the infinite-allele model (IAM) and the stepwise-mutation model (SMM) (Cornuet and Luikart 1996; Piry et al. 1999).

*

P<0.05,

**

P<0.01,

***

P<0.001.