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. 2012 Apr 17;7(4):e35558. doi: 10.1371/journal.pone.0035558

Table 1. MM/PBSA analysis of B, methylated B (BM), Z and methylated Z (ZM) DNA.

B SEB 1 Z SEZ 1 ΔB-Z BM SEBM 1 ZM SEZM 1 ΔBM-ZM
〈EELE 2 −777.4 1.15 −207.3 2.34 570.1 −880.0 5.49 −302.5 2.29 577.56
〈EVDW −165.7 0.29 −192.2 0.30 −26.5 −172.1 0.29 −202.7 0.29 −30.59
〈EINT 932.7 0.64 968.4 0.63 35.7 974.2 0.63 1016.4 0.65 42.14
〈EMM −10.4 1.19 568.8 2.34 579.3 −94.0 1.24 511.2 2.31 605.24
〈EPBSUR 22.9 0.01 21.0 0.01 −1.9 23.3 0.01 21.0 0.01 −2.26
〈EPBCAL −4655.9 1.05 −5219.6 2.20 −563.6 −4627.9 1.13 −5226.0 2.18 −598.09
〈EPBSOL −4633.0 1.05 −5198.5 2.20 −565.5 −4604.6 1.14 −5204.9 2.19 −600.34
〈EPBELE −5433.4 0.38 −5426.9 0.43 6.5 −5524.0 0.40 −5528.4 0.40 −4.40
〈EPBTOT −4643.4 0.59 −4629.7 0.61 13.8 −4698.6 0.58 −4693.7 0.65 4.89
-T〈 S〉 −524.6 0.21 −516.8 0.20 7.9 538.2 0.22 528.8 0.20 9.46
〈G〉 −5168.1 0.64 −5146.4 0.64 21.6 −5236.8 0.63 −5222.5 0.67 14.36
1

SE, standard error.

2

All energy values are in kcal/mol.