Table 1. Summary of DNA sequence production and filtering.
Edits | |||||
Library | Total sequences | CT presenta (%) | Pass quality controlb (%) | Mapped reads | Unique reads |
RK | 24,444,448 | 23,813,952 (97.4) | 23,778,699 (97.3) | 21,431,250 (87.7) | 12,633,495 (51.7) |
SK | 24,444,444 | 24,043,434 (98.4) | 24,007,307 (98.2) | 21,356,158 (87.4) | 12,415,226 (50.8) |
Total | 48,888,892 | 47,857,386 (97.9) | 47,786,006 (97.7) | 42,787,408 (87.5) | 25,048,721 (51.2) |
Sequences remaining after filtering those without a CT tag at the restriction site. bSequences remaining after sequentially filtering those that failed quality control (see the Methods section).