Table 3.

Overview of over-represented gene classes in DEG lists and comparison to literature data.

*Shown is the representation factor for DEGs in the respective list in relation to the overall count in significantly enriched gene classes or in comparison to literature data; red label and ↑ refer to up-, green label and ↓ to down-regulated genes; respective pale coloring corresponds to P < 0.05, deep colors to P < 0.001; gene glasses and datasets deemed to be most relevant are given in bold; for more details see Tables S5 and S6 in Supplementary Material. ¹Shaw et al. (2007), ²Evans et al. (2008), ³Fisher and Lithgow (2006), ⁴Troemel et al. (2006), ⁵Viswanathan et al. (2005), ⁶Pietsch et al. (2012).