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. 2011 Nov 17;6(5):961–974. doi: 10.1038/ismej.2011.160

Figure 5.

Figure 5

Probability of origin of the different phylotypes and clades of Ralstonia solanacearum. (a) Map of the eight geographical location states, as defined by ‘hclust' analysis (see Materials and methods). Black dots mark the countries sampled within each area. Cluster 1: Central and North America (Florida, North Carolina, Guatemala, Honduras); cluster 2: Austral Latin America (Peru, Brazil, Uruguay); cluster 3: North Latin America and Caribbean (Columbia, Venezuela, French Guyane, Trinidad, Grenada, Martinique, Guadeloupe); cluster 4: The Netherlands; cluster 5: Central and Western Africa (Cameroon, Nigeria, Burkina Faso, Guinea); cluster 6: Austral and Eastern Africa, Indian Ocean (Angola, Kenya, Zimbabwe, Madagascar, Reunion Island); cluster 7: Northeastern Asia (China, Taiwan, Japan, Philippines); cluster 8: Indonesia (Java, Borneo, Sumatra, Celebes) and Australia (Northern territory). (b) Maximum clade credibility tree constructed from the nine loci-concatenated sequence sets. Branches are coloured according to the most probable location state (1–8) of their descendant nodes, with the corresponding probability marked at the node. Strains are identified by their RUN ID or reference names (see Supplementary Table S1).