Skip to main content
. 2011 Nov 17;6(5):961–974. doi: 10.1038/ismej.2011.160

Table 1. Properties of the loci used in Ralstonia sp. multilocus sequence analysis (MLSA; 93 sequences).

Gene Length (bp) No. of haplotypes % Polymorphic sites πa
Tajima's Db Ka/Ksc
        Total Synonymous Nonsynonymous    
gdhA 966 59 22.981 0.027 0.091 0.009 −1.633 0.096
mutS 651 47 28.111 0.036 0.133 0.009 −1.692 0.076
ppsA 630 40 20.476 0.0398 0.154 0.009 −0.449 0.046
adk 468 54 6.838 0.020 0.063 0.007 0.800 0.120
leuS 735 49 18.503 0.025 0.086 0.009 −1.244 0.099
rplB 738 42 13.686 0.033 0.124 0.005 0.340 0.033
gyrB 423 65 22.695 0.028 0.091 0.011 −1.451 0.117
Egl 666 60 26.426 0.055 0.125 0.036 −0.053 0.273
fliC 348 39 12.356 0.023 0.063 0.011 −0.431 0.230
a

Nucleotide diversity, after Jukes and Cantor correction.

b

Not significant (P>0.05).

c

Synonymous (s) and nonsynonymous (a) substitution rate calculated by the Nei and Gojobori (1986) method.