Table 2. Gene Ontology (GO) terms found to be significantly over-represented in HVC and RA across breeding states.
Nucleus | GO code | GO description | expected | observed | Fisher | adj.Fisher |
HVC | GO:0017154 | semaphorin receptor activity | 0 | 4 | 1.00E-06 | 0.00068 |
GO:0043025 | cell soma | 1 | 6 | 5.00E-05 | 0.017 | |
GO:0046332 | SMAD binding | 0 | 4 | 0.00022 | 0.035 | |
GO:0004574 | oligo-1,6-glucosidase activity | 0 | 2 | 0.00027 | 0.035 | |
GO:0004575 | sucrose alpha-glucosidase activity | 0 | 2 | 0.00027 | 0.035 | |
RA | GO:0043025 | cell soma | 1 | 7 | 1.10E-05 | 0.0074 |