Table 1.
EMBOSS/water program | BLOSUM62 matrix | PfFSmat60 matrix | ||
---|---|---|---|---|
Organism | Length | Similarity (%) | Length | Similarity (%) |
P. berghei (PBANKA_102390) P. chabaudi (PCHAS_102470) P. falciparum (PF14_0187) P. knowlesi (PKH_132970) P. vivax (PVX_085515) P. yoelii (PY05088) |
200 208 206 200 200 208 |
39.50 36.50 37.40 38.50 38.00 36.50 |
247 247 248 246 250 250 |
55.90 56.30 57.30 57.70 57.60 54.80 |
FASTA program | BLOSUM50 matrix | PfFSmat60 matrix | ||
Organism | Length | E-value | Length | E-value |
P. berghei (PBANKA_102390) P. chabaudi (PCHAS_102470) P. falciparum (PF14_0187) P. knowlesi (PKH_132970) P. vivax (PVX_085515) P. yoelii (PY05088) |
71 22 22 190 166 73 |
0.05 0.15 1 0.05 0.07 0.10 |
229 229 233 231 231 231 |
3.90E-041 5.00E-039 1.80E-016 2.30E-042 1.00E-042 2.90E-037 |