Table 1.
Small RNA data sets considered
| Data set name | GEO series and platforms or data set link | Cell type details | References |
|---|---|---|---|
| hESC | Link from Genome Research website, see publication | H9 hESCs | (21) |
| EB | H9 human embryoid bodies | ||
| Centroblast | Derived from human tonsil | (28) | |
| Centrocyte | |||
| Naïve B cell | |||
| Plasma cell | |||
| Pre-germinal centre B cell | |||
| Memory B cell | |||
| THP-1 | Human monocytic leukaemia cell line | (22,29) | |
| NPC 5-8F | Human NPC 5-8F cells | (25) | |
| PBMC | Human normal PBMCs | (30) | |
| K562 | Human chronic myelogenous leukaemia cell line | ||
| HL60 | Human acute promyelocytic leukaemia cell line | ||
| HepG2 | Human liver carcinoma cell line | (31) |