. Author manuscript; available in PMC: 2013 Mar 1.

Published in final edited form as: Nat Protoc. 2012 Mar 1;7(3):562–578. doi: 10.1038/nprot.2012.016

TABLE 4.

Transfrag reconstruction statistics for the example data set.

Assembly	Full length	Partial	Novel
C1 rep 1	8,549	940	1,068
C1 rep 2	8,727	958	1,151
C1 rep 3	8,713	996	1,130
C2 rep 1	8,502	937	1,118
C2 rep 2	8,749	945	1,158
C2 rep 3	8,504	917	1,091
Merged with reference	21,919	35	2,191
Merged without reference	10,056	590	1,952