Table 1.
Component | Function | |
---|---|---|
Transcriptional | Constitutive promoter libraries [19,20] | Provide continuously ON gene expression at pre-determined levels |
Inducible promoters (for example, responsive to tetracycline, IPTG, gaseous acetaldehyde [22], or light [23]) | Provide conditional and, in certain cases, titratable gene expression in response to inducer signal | |
Posttranscriptional | Non-coding regulatory RNAs [28] (such as riboregulators [29,30], ribozyme switches [31,51], and RNAi switches [32,33]) | Control protein production levels by regulating mRNA stability or translation initiation in response to molecular input |
Alternative splicing modulators [35] | Control protein production levels or protein activity by regulating alternative splicing of mRNA in response to molecular input | |
RNase substrate libraries [80] | Control protein levels through tunable hairpin elements that direct transcript cleavage | |
Posttranslational | Degradation tags [24,25] | Modulate protein levels by shortening protein half-lives |
Split inteins [26,27] | Provide biosensing and modulate protein activity by conditionally splicing inactive protein fragments together into functional wholes | |
Structural | Protein [36-39], RNA [40], and DNA [93] scaffolds | Regulate signaling and metabolic pathway flux by controlling the localization and stoichiometry of pathway components and intermediate products |
IPTG, isopropyl-β-D-thio-galactoside; RNAi, RNA interference.