Table 2.
Annotion of the mitogenomes of Cnaphalocrocis medinalis (Cm) and Chilo suppressalis (Cs).
| Gene | Direction | Region | Size (bp) | IGN | Start codon | Stop codon | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cm | Cs | Cm | Cs | Cm | Cs | Cm | Cs | Cm | Cs | ||
| trnM | F | 1..68 | 1..68 | 68 | 68 | 0 | -1 | - | - | - | - |
| trnI | F | 69..133 | 68..133 | 65 | 66 | -3 | 0 | - | - | - | - |
| trnQ | R | 131..199 | 134..202 | 69 | 69 | 74 | 52 | - | - | - | - |
| nad2 | F | 274..1290 | 255..1268 | 1017 | 1014 | 5 | 7 | ATT | ATT | TAA | TAA |
| trnW | F | 1296..1363 | 1276..1343 | 68 | 68 | -8 | -8 | - | - | - | - |
| trnC | R | 1356..1423 | 1336..1402 | 68 | 67 | 5 | 30 | - | - | - | - |
| trnY | R | 1429..1495 | 1433..1500 | 67 | 68 | 41 | 6 | - | - | - | - |
| cox1 | F | 1537..3067 | 1507..3037 | 1531 | 1531 | 3 | 0 | CGA | CGA | T- | T- |
| trnL2(UUR) | F | 3068..3134 | 3038..3104 | 67 | 67 | 0 | 0 | - | - | - | - |
| cox2 | F | 3135..3816 | 3105..3786 | 682 | 682 | 0 | 0 | ATG | ATA | T- | T- |
| trnK | F | 3817..3887 | 3787..3857 | 71 | 71 | 11 | 0 | - | - | - | - |
| trnD | F | 3899..3964 | 3858..3925 | 66 | 68 | 0 | 0 | - | - | - | - |
| atp8 | F | 3965..4132 | 3926..4090 | 168 | 165 | -7 | -7 | ATT | ATC | TAA | TAA |
| atp6 | F | 4126..4800 | 4084..4764 | 675 | 681 | -1 | -1 | ATG | ATG | TAA | TAA |
| cox3 | F | 4800..5588 | 4764..5552 | 789 | 789 | 2 | 2 | ATG | ATG | TAA | TAA |
| trnG | F | 5591..5655 | 5555..5621 | 65 | 67 | 0 | 0 | - | - | - | - |
| nad3 | F | 5656..6009 | 5622..5975 | 354 | 354 | 46 | 101 | ATT | ATT | TAA | TAA |
| trnA | F | 6056..6121 | 6077..6144 | 66 | 68 | 1 | -1 | - | - | - | - |
| trnR | F | 6123..6189 | 6144..6212 | 67 | 69 | 0 | -1 | - | - | - | - |
| trnN | F | 6190..6256 | 6212..6278 | 67 | 67 | 2 | 1 | - | - | - | - |
| trnS1(AGN) | F | 6259..6324 | 6280..6345 | 66 | 66 | 1 | 0 | - | - | - | - |
| trnE | F | 6326..6393 | 6346..6414 | 68 | 69 | -2 | 0 | - | - | - | - |
| trnF | R | 6392..6460 | 6415.. 6481 | 69 | 67 | 0 | -17 | - | - | - | - |
| nad5 | R | 6461..8195 | 6465.. 8216 | 1735 | 1752 | 0 | 0 | ATT | ATT | T- | TAA |
| trnH | R | 8196..8261 | 8217.. 8281 | 66 | 65 | 0 | 0 | - | - | - | - |
| nad4 | R | 8262..9601 | 8282.. 9621 | 1340 | 1340 | -1 | 7 | ATG | ATG | TA- | TA- |
| nad4L | R | 9601..9894 | 9629.. 9922 | 294 | 294 | 2 | 2 | ATG | ATG | TAA | TAA |
| trnT | F | 9897..9961 | 9925.. 9989 | 65 | 65 | 0 | 0 | - | - | - | - |
| trnP | R | 9962..10027 | 9990..10055 | 66 | 66 | 2 | 2 | - | - | - | - |
| nad6 | F | 10030..10566 | 10058..10597 | 537 | 540 | 6 | -1 | ATT | ATT | TAA | TAA |
| cob | F | 10573..11721 | 10597..11742 | 1149 | 1146 | 1 | 3 | ATG | ATG | TAA | TAA |
| trnS2(UCN) | F | 11723..11790 | 11746..11811 | 68 | 66 | 16 | 12 | - | - | - | - |
| nad1 | R | 11807..12745 | 11824..12765 | 939 | 942 | 1 | 1 | ATG | ATG | TAA | TAA |
| trnL1(CUN) | R | 12747..12813 | 12767..12833 | 67 | 67 | -1 | -25 | - | - | - | - |
| rrnL | R | 12814..14202 | 12809..14191 | 1384 | 1383 | 0 | 0 | - | - | - | - |
| trnV | R | 14203..14268 | 14192..14259 | 66 | 68 | 0 | 0 | - | - | - | - |
| rrnS | R | 14269..15049 | 14260..15047 | 781 | 788 | 0 | 0 | - | - | - | - |
| A+T-rich region | 15050..15388 | 15048..15395 | 339 | 348 | 0 | 0 | - | - | - | - | |
IGN indicates intergenic nucleotide.