Table 1. Somatic mutations identified in 3′-untranslated regions of candidate mRNAs.
Gene | Nucleotide change1 | MicroRNA binding affected by mutation | Predictive algorithm | Sample ID |
AKT2 | c.*892C>T | hsa-miR-429 | DIANA-microT [47], [48] | P1768 |
CTNNB1 | c.*538T>A | hsa-miR-640 2 | miRanda [49] | P0511 |
hsa-miR-10a | miRanda | |||
hsa-miR-587 | miRanda | |||
EGFR | c.*101C>G | - | - | IC151 |
ERBB2 | c.*460G>C | hsa-miR-495 | miRanda | P5514 |
hsa-miR-630 2 | microCOSM Targets [40] |
Nucleotide changes are described relative to the following sequences: AKT2 NM_001626.3; CTNNB1 NM_001904.3; EGFR NM_005228.3; ERBB2 NM_004448.2.
Indicates that the somatic mutation occurs within the microRNA-mRNA interaction at the seed region.