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. 2012 Apr 24;7(4):e35961. doi: 10.1371/journal.pone.0035961

Table 1. Major characteristics of DGEP libraries and mapping information.

Sample Raw Trim adaptor Drop low quality Drop CopyNum = 1 (clean tags) Distinct clean tags Mapped tags Mapping rate
0 h 3503924 3420205 3420205 3314401 135590 113281 83.55%
24 h 3202434 3061865 3023002 2743030 207118 135265 65.31%
48 h 3719941 3173209 3166328 2986395 92100 135265 75.32
72 h 7762517 3487600 3474314 3373054 98148 72965 74.34%

Trim adaptor: adaptor tags were filtered.

Drop low quality: low quality tags were filtered.

Drop CopyNum = 1: tags of copy number = 1 were filtered.

Distinct clean tags: different kinds of clean tags.