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. 2012 Apr 24;7(4):e35974. doi: 10.1371/journal.pone.0035974

Table 4. Molecular function of predicted consensus GO terms for the PPR model.

Consensus GO terms Molecular function description
GO:0003824 Enzyme activity. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein.
GO:0005488 Ligand. The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO:0000166 Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO:0005524 Interacting selectively and non-covalently with ATP, adenosine 5′-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0016874 Catalysis of the joining of two substances, or two groups within a single molecule, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.
GO:0005515 Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0016787 Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
GO:0003989 Catalysis of the reaction: ATP+acetyl-CoA+HCO3− = ADP+phosphate+malonyl-CoA.
GO:0004650 Catalysis of the random hydrolysis of (1→4)-alpha-D-galactosiduronic linkages in pectate and other galacturonans.
GO:0046872 Interacting selectively and non-covalently with any metal ion.

Consensus GO terms in ranked order. Ranking based on GO scores [43], [44].