Table 3.
Subfamily | No. of genes | Root | Leaf | Panicle | |||
---|---|---|---|---|---|---|---|
Up (%) | Down (%) | Up (%) | Down (%) | Up (%) | Down (%) | ||
Minghui 63 under normal conditions | |||||||
TIP | 10 (14) | 2 (20) | 0 | 1 (10) | 0 | 0 | 0 |
NAM/CUC3 | 13 (17) | 3 (23) | 0 | 2 (15) | 1 (7) | 0 | 1 (7) |
NAC1 | 5 (6) | 1 (20) | 0 | 1 (20) | 0 | 1 (20) | 0 |
NAC22 | 5 (5) | 0 | 0 | 0 | 0 | 0 | 0 |
SND | 10 (14) | 0 | 0 | 1 (10) | 0 | 1 (10) | 0 |
ANAC34 | 10 (13) | 0 | 1 (10) | 1 (10) | 0 | 0 | 1 (10) |
SNAC | 14 (14) | 1 (7) | 1 (7) | 0 | 2 (28) | 0 | 2 (28) |
ONAC4 | 14 (14) | 2 (28) | 0 | 1 (7) | 0 | 1 (7) | 0 |
ONAC2 | 16 (16) | 0 | 0 | 2 (12) | 0 | 0 | 0 |
ONAC3 | 15 (17) | 1 (6) | 0 | 1 (6) | 1 (6) | 1 (6) | 1 (6) |
ONAC1 | 8 (8) | 0 | 0 | 0 | 0 | 0 | 0 |
ONAC7 | 5 (5) | 1 (20) | 0 | 0 | 1 (20) | 0 | 1 (20) |
IR77298-14-1-2-B-10 under severe stress conditions | |||||||
TIP | 9 (14) | 2 (22) | 3 (33) | 2 (22) | 1 (11) | 4 (44) | 1 (11) |
NAM/CUC3 | 11 (17) | 0 | 3 (27) | 8 (72) | 1 (9) | 3 (27) | 3 (27) |
NAC1 | 4 (6) | 0 | 2 (50) | 2 (50) | 1 (25) | 0 | 3 (75) |
NAC22 | 4 (5) | 0 | 4 (100) | 1 (25) | 1 (25) | 1 (25) | 2 (50) |
SND | 8 (14) | 3 (37) | 1 (12) | 1 (12) | 2 (25) | 2 (25) | 2 (25) |
ANAC34 | 9 (13) | 1 (11) | 5 (45) | 0 | 7 (77) | 2 (22) | 0 |
SNAC | 14 (14) | 1 (7) | 5 (36) | 10 (71) | 0 | 8 (57) | 2 (14) |
ONAC4 | 10 (14) | 1(10) | 1 (10) | 2 (20) | 0 | 5 (50) | 3 (30) |
ONAC2 | 10 (16) | 2 (20) | 1 (10) | 3 (30) | 3 (30) | 0 | 2 (20) |
ONAC3 | 11 (17) | 0 | 2 (18) | 1 (9) | 1 (9) | 2 (18) | 3 (27) |
ONAC1 | 4 (8) | 0 | 3 (75) | 1 (25) | 3 (75) | 1 (25) | 1 (25) |
ONAC7 | 4 (5) | 1 (25) | 3 (75) | 1 (25) | 3 (75) | 1 (25) | 1 (25) |
Bold values indicate greater difference between normal and stressed conditions
() = the number of genes in each subfamily is indicated in parentheses, classification by Nuruzzaman et al. (2010). Selected tissues from Minghui 63, Root = seedling with 2 tillers, Leaf 1 = young panicle at stage 3, Panicle 1 = young panicle at stage 3, Up = up-regulated genes, Down = down-regulated genes