Table 2 . Smaller deficiencies and individual genes, which confirmed original interactions.
| DrosDel deficiency | Subdividing deficiencies | Genes identified | sev-GAL4, UAS-dgo interaction | sev-GAL4, UAS-pk interaction |
|---|---|---|---|---|
| Df(1)ED6957 | Nonea | ND | ||
| Df(1)ED7161 | Df(1)ED7153 | CG17788 (no RNAi), CG15926 (no RNAi), CG2556, CG15730, CG11146, CG32653 | CG15730: enh(rota) | Su (chir)b |
| Df(1)Exel6244 | CG11146: nob | Enh (rota + chir) | ||
| Df(1)ED447 | Nonec | CG6461, CG6470, CG6335, CG10548, CG6481, CG15042, CG15047 | ||
| Df(2L)ED62 | Df(2L)Exel8003 | ds, CG2863 | ||
| Df(2L)ED94 | ||||
| Df(2L)ED49 | ||||
| dsUA071 | ||||
| Df(2L)ED623 | Df(2L)ED611 | CG13388, CG13399, CG13400 | Su (chir)b | Su (rota + chir)b |
| Df(2L)ED647 | Enh (rota) | |||
| Df(2L)Exel8021 | ||||
| Df(2L)ED793 | Df(2L)b87a25 | CG15283, CG4491, noc, CG15284, CG3474 | Enh (rota) | Nob |
| Df(2L)Exel6036 | ||||
| Df(2L)Exel6035 | ||||
| Df(2L)Exel8033 | ||||
| Df(2L)ED1315 | Nonec | CG31683, CG31687, CG18858 | Enh (rota) | Enh (rota + chir) |
| Df(2R)ED1618 | Df(2R)ED1673 | Pk | ||
| Df(2R)ED1673 | Df(2R)ED1618 | Pk | ||
| Df(3L)ED201 | Df(3L)Exel6084 | CG7004 | Enh (rota) | Enh (rota + chir)b |
| fwd Df(3L)Exel9057 | ||||
| fwdneo1 | ||||
| Df(3L)ED207 | Nonea | ND | ||
| Df(3L)ED220 | Df(3L)st[b11]d | ND | ||
| Df(3L)ED230 | Df(3L)Al29 | CG11438, CG11426 | ND | ND |
| Df(3L)AK1 | ||||
| Df(3L)ED5017 | Nonee | ND | ||
| Df(3R)ED7665 | Nonec | CG14612 (no RNAi), CG1070 (no RNAi), CG1019, CG10098 (ND), CG10068 | Enh (rota)f | No |
| Df(3R)ED5577 | Df(3R)Exel7316 | ND | ||
| Df(3R)ED5623 | Nonea | ND | ||
| Df(3R)ED5644 | Df(3R)Exel6267 | ND | ||
| Df(3R)ED5942 | Df(3R)Cha9 | Dl | ||
| Df(3R)Dl[RF] | ||||
| Df(3R)Dl[7] | ||||
| Df(3R)ED10639 | Df(3R)Exel7329 | CG6889, CG6815, CG6814, CG6864, CG12785, CG6963, CG31283 | Enh (rota) | ND |
The DrosDel and smaller deficiencies are listed in the first and second columns, respectively. The third column lists all genes that were tested by RNAi knockdown for PCP phenotypes. Genes that affected PCP when knocked down (compare Table 3) and reproduced the effects of the original deficiency are indicated in boldface type. Df(2L)ED62 and Df(3R)ED5642 covered ds and Dl, respectively (compare Figure S1). Columns 4 and 5 list genes and the quality of their genetic interactions that reproduced the original genetic interactions with screen genotypes.
Full coverage by other dfs.
Genetic interaction is different from what was observed with initial deficiency.
Genes tested based on exclusion from smaller Dfs.
Approximately 60 gene overlap.
No smaller Dfs, close to centromere.
Genetic interaction is a subset of what was observed originally.