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. 2012 Apr 25;7(4):e35618. doi: 10.1371/journal.pone.0035618

Table 5. Summary for ciliary candidates supported by the Protein Atlas data.

Symbol Novelty category Number of datasets in which the gene belongs to the ciliary module Validation
Tissue specificity (P-value) Protein Atlas
ACYP1 III 5 1.0E-06 Class B (Mixed localization)
ARMC2 III 8 1.7E-06 Class A (Cilia)
BAIAP3 III 4 NS Class A (Cilia)
C1orf87 II 9 1.0E-06 Class A (Cilia)
C1orf92 III 6 1.0E-06 Class A (Cilia)
C1orf129 III 4 NS Class B (Apical cytoplasm)
C1orf222 II 4 NS Class A (Cilia)
C6orf103 II 5 1.0E-06 Class B (Mixed localization)
C9orf9 II 4 1.1E-03 Class A (Cilia)
C10orf92 III 6 8.2E-06 Class A (Cilia)
C11orf63 III 4 1.7E-06 Class A (Cilia)
C11orf66 II 5 NS Class A (Cilia)
C14orf179 II 4 1.0E-06 Class A (Cilia)
C21orf58 III 7 1.0E-06 Class A (Cilia)
C22orf23 III 7 NS Class A (Cilia)
CCDC89 III 5 1.6E-05 Class A (Cilia)
CIB1 III 4 1.0E-06 Class A (Cilia)
DCDC5 III 4 1.0E-06 Class B (Apical cytoplasm)
DZIP3 II 6 1.1E-05 Class A (Cilia)
FANK1 II 9 1.0E-06 Class B (Cilia & cytoplasm)
FLJ16686 III 4 2.7E-04 Class B (Apical cytoplasm)
FSD1L II 4 NS Class A (Cilia)
IQCK III 6 1.0E-06 Class A (Cilia)
KIAA0319 III 5 NS Class A (Cilia)
KCNRG II 6 1.0E-06 Class A (Cilia)
LPAR3 III 5 1.0E-06 Class A (Cilia)
LRGUK III 6 5.0E-06 Class A (Cilia)
LRP2BP II 7 7.9E-05 Class A (Cilia)
LRRC6 II 6 1.0E-06 Class B (Mixed localization)
LRRC18 III 6 7.8E-05 Class A (Cilia)
LRRIQ3 III 4 6.3E-04 Class A (Cilia)
MIPEP II 5 3.6E-02 Class A (Cilia)
NEK10 II 5 1.9E-02 Class B (Mixed localization)
NUP62CL III 7 1.0E-06 Class A (Cilia)
PLCH1 II 4 1.7E-06 Class A (Cilia)
PPM1E III 6 NS Class A (Cilia)
PPP1R16A II 4 3.1E-02 Class B (Apical cytoplasm)
RBKS II 4 1.2E-04 Class B (Cilia & cytoplasm)
RBM20 III 4 NS Class A (Cilia)
RGS22 III 8 1.0E-06 Class A (Cilia)
SPAG17 II 7 1.0E-06 Class A (Cilia)
SPATA18 II 10 1.0E-06 Class B (Apical cytoplasm)
SYTL3 III 4 7.6E-04 Class B (Apical cytoplasm)
UBXN10 II 8 1.0E-06 Class A (Cilia)
UFC1 III 5 1.0E-06 Class A (Cilia)
WDR49 II 9 8.5E-05 Class B (Apical cytoplasm)

The table includes 46 signature genes that belong to the novelty categories II or III (proteins with weak or no evidence from the previous studies, respectively) and are supported as cilia-related by the Human Protein Atlas data. Summary for all the signature genes is provided in the Table S10. ‘NS’ – non-significant.