Table 2. Measures of genetic diversity and divergence for 15 population and three groups based on haplotype frequencies using CONTRIB 1.02 (see Table 1 for site and group abbreviations).
Samplesize | Nb Hap | h | ho | r(13) | DHs | DHt | DGst | Ct | Cs | Cd | Cr t | Cr s | Cr d | |
Population levels | ||||||||||||||
CW | 32 | 4 | 0.181 | 0.090 | 1.219 | 0.207 | 0.211 | 0.018 | −0.017 | −0.014 | −0.003 | −0.111 | −0.004 | −0.106 |
DG | 30 | 5 | 0.515 | 0.089 | 2.290 | 0.362 | 0.404 | 0.104 | 0.108 | 0.086 | 0.022 | −0.008 | 0.046 | −0.054 |
DS | 32 | 2 | 0.063 | 0.058 | 0.406 | 0.152 | 0.160 | 0.056 | −0.05 | −0.050 | 0.000 | −0.155 | −0.042 | −0.113 |
SS | 15 | 3 | 0.257 | 0.142 | 1.733 | 0.242 | 0.242 | 0.002 | 0.003 | 0.009 | −0.005 | −0.062 | 0.02 | −0.081 |
ZS | 52 | 5 | 0.184 | 0.072 | 1.191 | 0.208 | 0.213 | 0.022 | −0.016 | −0.013 | −0.002 | −0.106 | −0.006 | −0.100 |
NJ | 30 | 5 | 0.253 | 0.104 | 1.733 | 0.24 | 0.242 | 0.010 | 0.003 | 0.007 | −0.004 | −0.085 | 0.02 | −0.105 |
NR | 32 | 4 | 0.181 | 0.09 | 1.219 | 0.207 | 0.211 | 0.018 | −0.017 | −0.014 | −0.003 | −0.111 | −0.004 | −0.106 |
HK | 30 | 3 | 0.131 | 0.082 | 0.867 | 0.183 | 0.189 | 0.029 | −0.031 | −0.029 | −0.002 | −0.127 | −0.021 | −0.106 |
WZ | 14 | 2 | 0.143 | 0.119 | 0.929 | 0.189 | 0.193 | 0.020 | −0.029 | −0.026 | −0.003 | −0.098 | −0.018 | −0.080 |
XM | 32 | 5 | 0.238 | 0.099 | 1.625 | 0.233 | 0.236 | 0.013 | −0.001 | 0.003 | −0.003 | −0.087 | 0.015 | −0.102 |
SZ | 14 | 2 | 0.264 | 0.136 | 1.000 | 0.245 | 0.250 | 0.021 | 0.008 | 0.011 | −0.002 | −0.062 | −0.015 | −0.047 |
MZ | 24 | 4 | 0.239 | 0.113 | 1.625 | 0.234 | 0.236 | 0.009 | −0.001 | 0.003 | −0.004 | −0.09 | 0.015 | −0.105 |
PT | 29 | 3 | 0.135 | 0.085 | 0.897 | 0.185 | 0.190 | 0.026 | −0.030 | −0.028 | −0.002 | −0.126 | −0.019 | −0.106 |
QD | 21 | 3 | 0.452 | 0.105 | 1.616 | 0.333 | 0.364 | 0.087 | 0.082 | 0.067 | 0.015 | −0.028 | 0.014 | −0.042 |
NA | 30 | 4 | 0.193 | 0.095 | 1.300 | 0.212 | 0.216 | 0.016 | −0.014 | −0.011 | −0.003 | −0.106 | 0.000 | −0.105 |
Group level | ||||||||||||||
YS group | 51 | 5 | 0.481 | 0.068 | 3.619 | 0.344 | 0.388 | 0.115 | 0.372 | 0.279 | 0.093 | −0.004 | −0.029 | 0.025 |
ECS group | 295 | 25 | 0.193 | 0.031 | 4.135 | 0.272 | 0.295 | 0.077 | −0.201 | −0.160 | −0.041 | 0.035 | 0.025 | 0.010 |
SCS group | 43 | 5 | 0.220 | 0.083 | 3.930 | 0.279 | 0.300 | 0.070 | −0.170 | −0.119 | −0.052 | −0.104 | 0.004 | −0.108 |