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. 2012 Apr 27;7(4):e35920. doi: 10.1371/journal.pone.0035920

Table 1. ESI-MS spectra of PBDs (PBD1 and PBD2) and TMPyP4 with G-quadruplex DNA with m/z (Relative abundances) and stoichiometry.

G-quadruplex Ligand m/z (Relative abundance) Charge of the complex Quadruplex∶Ligand
d(T2G8) No ligand 473 (100) [QT+2K−H]27− 1∶0
593 (30) [QT+9K−H]22− 1∶0
930 (15) [QT+8K−H]14− 1∶0
1060 (27) [QD+NH4−3H]6− 1∶0
1278 (12) [QD+2NH4−H]5− 1∶0
1597 (11) [QD+2NH4−2H]4− 1∶0
d(T2G8) PBD1 473 (100) [QT+2K−H]27− 1∶0
516 (15) [QT+PBD1+5K−H]26− 1∶1
530 (23) [QT+PBD1+K−H]25− 1∶1
545 (23) [QT+10K−H]24− 1∶0
562 (75) [QT+PBD1+7K−H]24− 1∶1
578 (15) [QT+PBD1+2K−H]23− 1∶1
592 (28) [QT+8K+NH4−H]22− 1∶0
608 (3) [QT+PBD1+4K−H]22− 1∶1
622 (3) [QT+9K+NH4−H]21− 1∶0
638 (3) [QT+PBD1+4K−H]21− 1∶1
652 (2) [QT+9K−H]20− 1∶0
1060 (4) [QD+NH4−3H]6− 1∶0
1277 (2.6) [QD+2NH4−2H]5− 1∶0
1597 (2) [QD+2NH4−2H]4− 1∶0
d(T2G8) PBD2 473 (60) [QT+2K−H]27− 1∶0
561 (17) [QT+PBD2+5K−H]24− 1∶1
575 (100) [QT+PBD2+NH4−2H]23− 1∶1
593 (30) [QT+9K−H]22− 1∶0
607 (82) [QT+PBD2+2K−H]22− 1∶1
653 (4) [QT+9K−H]20− 1∶0
667 (4) [QT+PBD2+2K−H]20− 1∶1
1060 (3) [QD+NH4−4H]6− 1∶0
1278 (1.0) [QD+2NH4−H]5− 1∶0
1597 (0.5) [QD+2NH4−2H]4− 1∶0
d(T2G8) TMPyP4 473 (100) [QT+2K−H]27− 1∶0
592 (5) [QT+8K+NH4−H]22− 1∶0
721 (15) [QT+7K−H]18− 1∶0
793 (30) [QT+TMPyP4+6K−2H]18− 1∶1
853 (27) [QT+2K+NH4−H]15− 1∶0
930 (7) [QT+8K−H]14− 1∶0
1174 (0.3) [QT+TMPyP4+NH4−H]12− 1∶1
1284 (2.6) [QT+TMPyP4+3NH4−H]11− 1∶1
1597 (0.4) [QD+2NH4−2H]4− 1∶0