Table 1.
Low temperature responsive transcripts related to 'Response to abiotic and biotic stimulus' and 'Response to stress'
| Probe Name | Description | 4 h/0 h | 9 h/0 h | 9 h/4 h | AGI Locus | E Value |
|---|---|---|---|---|---|---|
| Log2 Ratio | ||||||
| 'Response to abiotic and biotic stimulus' and 'Response to stress' | ||||||
| CUST_2332 | AP2 domain transcription factor | - | 4.02 | - | AT4G34410 | 1.60E-23 |
| CUST_14118 | SSI2 (fatty acid biosynthesis 2) | 2.31 | 3.69 | 1.38 | AT2G43710 | 1.80E-57 |
| CUST_12833 | alpha-crystallin domain 31.2 | - | 2.73 | 2.33 | AT1G06460 | 5.80E-21 |
| CUST_12238 | MAP kinase 4 | - | 2.55 | - | AT4G01370 | 1.30E-16 |
| CUST_5259 | proline extensin-like receptor kinase 1 | 1.18 | 2.46 | 1.28 | AT3G24550 | 3.40E-29 |
| CUST_11123 | heat shock protein 18.2 | - | 2.23 | 1.59 | AT5G59720 | 2.10E-48 |
| CUST_8810 | Bet v I allergen family protein | 1.81 | 2.16 | - | AT5G28010 | 4.90E-06 |
| CUST_7667 | chitinase | - | 2.04 | - | AT3G12500 | 1.50E-11 |
| CUST_11923 | MEE14 (maternal effect embryo arrest 14) | - | 1.85 | 1.81 | AT2G15890 | 3.40E-42 |
| CUST_6563 | MLP-like protein 31 | - | 1.72 | - | AT1G70840 | 1.00E-43 |
| CUST_15946 | MLP-like protein 31 | - | 1.42 | - | AT1G70840 | 2.30E-38 |
| CUST_11303 | MLP-like protein 34 | - | 1.42 | - | AT1G70850 | 2.60E-24 |
| CUST_3534 | Jasmonic acid carboxyl methyltransferase | - | 1.18 | - | AT1G19640 | 5.40E-40 |
| CUST_10998 | MLP-like protein 423 | - | 1.14 | - | AT1G24020 | 2.00E-10 |
| CUST_12659 | beta-ketoacyl-CoA synthase | - | 1.11 | - | AT5G43760 | 1.40E-63 |
| CUST_3051 | CAT2 (catalase 2) | - | 1.11 | 1.01 | AT4G35090 | 7.60E-76 |
| CUST_14725 | heat shock protein 17.4 | - | 1.06 | - | AT3G46230 | 4.10E-33 |
| CUST_17985 | TCH2 (calcium ion binding protein) | - | - | 1.09 | AT5G37770 | 2.10E-39 |
| CUST_14955 | ERF2 (ethylene response transcription activator 2) | - | - | 3.35 | AT5G47220 | 1.50E-33 |
| CUST_7141 | MAP kinase kinase 9 | - | - | 1.46 | AT1G73500 | 1.70E-42 |
| CUST_14327 | RING-H2 finger A2A zinc ion binding | - | -1.04 | - | AT1G15100 | 5.40E-14 |
| CUST_13235 | GAI (gibberellic acid insensitive) transcription factor | - | -1.07 | - | AT1G14920 | 2.00E-108 |
| CUST_14166 | GSTU19 (glutathione transferase) | - | -1.12 | - | AT1G78380 | 1.90E-70 |
| CUST_9208 | UDP-glucosyltransferase | - | -1.25 | - | AT4G01070 | 8.80E-42 |
| CUST_6759 | MYB family transcription factor | - | -1.49 | - | AT1G49010 | 9.30E-41 |
| CUST_5609 | RING-H2 finger A2A zinc ion binding | - | -1.97 | - | AT1G15100 | 6.70E-39 |
| CUST_18370 | CBL-interacting protein kinase 25 | - | -2.03 | - | AT5G25110 | 9.90E-17 |
| 'Response to abiotic and biotic stimulus' | ||||||
| CUST_2683 | early flowering 4 | - | 4.01 | 3.64 | AT2G40080 | 1.00E-25 |
| CUST_4383 | gibberellin 2-beta-dioxygenase | - | 3.63 | - | AT1G30040 | 4.70E-51 |
| CUST_11786 | ubiquitin-protein ligase | - | 3.48 | 3.32 | AT1G68050 | 8.90E-60 |
| CUST_12768 | pesudo-response regulator 5 | - | - | 1.31 | AT5G24470 | 2.80E-20 |
| CUST_14809 | SIGB (SIGMA FACTOR B) | - | -1.03 | - | AT1G08540 | 5.30E-20 |
| CUST_14095 | polyubiquitin 3 protein binding | - | -1.05 | - | AT5G03240 | 8.90E-17 |
| CUST_11479 | zinc ion binding | - | -1.18 | -1.01 | AT1G52520 | 1.00E-72 |
| 'Response to stress' | ||||||
| CUST_8448 | peroxidase 72 | - | 3.42 | 2.57 | AT5G66390 | 3.90E-35 |
| CUST_8771 | Homolog of yeast autophagy 18 | - | 2.24 | - | AT3G62770 | 2.80E-63 |
| CUST_11592 | ozone-responsive stress-related protein | - | 1.72 | - | AT1G01170 | 7.10E-27 |
| CUST_10706 | ABA-responsive element binding protein 3 | - | -1.18 | - | AT3G56850 | 1.20E-35 |
| CUST_11310 | disease resistance protein (CC-NBS-LRR) | - | -1.18 | - | AT1G61190 | 6.40E-06 |
| CUST_18065 | ABA-responsive element binding protein 3 | - | -1.22 | - | AT3G56850 | 2.30E-20 |
Notes: Low temperature responsive genes are grouped to 'Response to abiotic and biotic stimulus' and 'Response to stress' based on the GO annotation. Positive and negative values of Log2 Ratio are either up- or down-regulated genes in the three pair-comparisons. No significant fold changes are indicated by "-".