Table 2.
GO term | Cluster frequency (%) | Genome frequency | Corrected P value | FDR (%) | False positive |
---|---|---|---|---|---|
Cellular process | 51.3 | 31.0 | 0.04406 | 0.80 | 0.12 |
Metabolic process | 39.7 | 20.0 | 0.0147 | 0.00 | 0 |
Cellular metabolic Process | 34.6 | 17.0 | 0.03719 | 0.46 | 0.06 |
Regulation of metabolic process | 23.1 | 8.0 | 0.01117 | 0.00 | 0 |
Regulation of cellular metabolic process | 21.8 | 7.5 | 0.01746 | 0.29 | 0.02 |
Protein metabolic process | 20.5 | 6.8 | 0.01671 | 0.33 | 0.02 |
Unannotated | 19.2 | 3.2 | 5.90E-06 | 0.00 | 0 |
Cellular protein metabolic process | 17.9 | 5.4 | 0.01945 | 0.22 | 0.02 |
Intracellular signaling pathway | 12.8 | 2.8 | 0.01786 | 0.25 | 0.02 |
Regulation of molecular function | 11.5 | 1.7 | 0.00192 | 0.00 | 0 |
Regulation of catalytic activity | 10.3 | 1.4 | 0.00428 | 0.00 | 0 |
Regulation of phosphorylation | 7.7 | 0.9 | 0.0238 | 0.20 | 0.02 |
Regulation of phosphate metabolic process | 7.7 | 0.9 | 0.02914 | 0.18 | 0.02 |
Regulation of phosphorus metabolic process | 7.7 | 0.9 | 0.02914 | 0.17 | 0.02 |
Positive regulation of molecular function | 7.7 | 1.0 | 0.03889 | 0.43 | 0.06 |
GO terms analysis was carried out using gene probes identified in clustering analysis. FDR, False discovery rate.