TABLE 1.
AFM-identified sequences bound by STAT3 in the pGAS-TA-Luc plasmid
Site | Distance from NotI site | Corresponding sequences |
---|---|---|
S100 | 85–110 bp | (S + 100) 5′-AAAACAAAACGAAACAAACAAACTA |
(S-100) 5′-CGCAACTGTTGGGAAGGGCGATCG | ||
S333 | 320–350 bp | (S + 330) 5′-CGCCAAAAACATAAAGAAAG |
(S-330) 5′-GTTTTTCGCCCTTTGACGTTG | ||
GAS | 167–195 bp | (GAS) 5′- GTTTCCGGGAAAGCAGTAGGTTTCCGGGAAAG-3′ |
S+100 | S + 100 mut#1 AAAACAGAACGAGACAGACAAACTA | |
mutantsa | S + 100 mut#2 AAGGCAGGACGAGGCAGGCAGGCTA |
a S+100 mutants were generated by substitution of A nucleotides within AT-rich hexanucleotides with G nucleotides. The positions of mutated bases are in bold and underlined.