Table 4.
Table to show the list of loci up-regulated by GA application, together with predicted annotations based on BLASTX hits in public databases
| Locus ID | Transcript Length (bp) | BLASTX best hits DB Accessions | p-value | Annotation |
|---|---|---|---|---|
| 12027 | 1800 | ABV08820.1 | 0 | acetoacetyl-coenzyme A thiolase [Salviamiltiorrhiza] |
| ABC74567.1 | 0 | acetoacetyl-CoA thiolase [Picrorhiza kurrooa] | ||
| NP_568694.2 | 0 | acetyl-CoA acetyltransferase, cytosolic 1 [Arabidopsis thaliana] | ||
| AAU95618.1 | 0 | cytosolic acetoacetyl-coenzyme A thiolase [Nicotiana tabacum] | ||
| 30091 | 1389 | AAW83819.1 | 6 × 10-49 | GASA2-like protein [Pelargonium zonale] |
| CBI30071.3 | 6 × 10-48 | unnamed protein product [Vitis vinifera] | ||
| XP_002276458.1 | 8 × 10-48 | PREDICTED: hypothetical protein [Vitis vinifera] | ||
| ABQ42002.1 | 5 × 10-46 | gibberellin induced protein [Sonneratia caseolaris] | ||
| ABD33300.1 | 9 × 10-45 | Gibberellin regulated protein [Medicago truncatula] | ||
| AEC10958.1 | 1 × 10-43 | gibberellin induced protein [Camellia sinensis] | ||
| 43376 | 829 | AAD10836.1 | 3 × 10-50 | P-glycoprotein [Solanum tuberosum] |
| XP_002323485.1 | 6 × 10-48 | multidrug/pheromone exporter, MDR family, ABC transporter family [Populus trichocarpa] | ||
| ABB97035.1 | 4 × 10-47 | ABC transporter-like protein [Brassica rapa] | ||
| 54049 | 574 | ACU23396.1 | 2 × 10-56 | unknown [Glycine max] |
| XP_002532163.1 | 1 × 10-48 | DNA-damage-inducible protein f, putative [Ricinus communis] | ||
| NP_001164052.1 | 2 × 10-44 | MATE family protein [Zea mays] | ||
| XP_002891631.1 | 1 × 10-43 | mate efflux family protein [Arabidopsis lyrata subsp. lyrata] | ||
| ADK70243.1 | 2 × 10-43 | aluminum activated citrate transporter 1-5 [Secale cereale] | ||
| BAD87624.1 | 7 × 10-39 | MATE efflux family protein-like [Oryza sativa Japonica Group] | ||
| 73039 | 873 | NP_001151695.1 | 2 × 10-49 | gamma-interferon-inducible lysosomal thiol reductase [Zea mays] |
| NP_563779.1 | 3 × 10-48 | GILT domain-containing protein [Arabidopsis thaliana] | ||
| 6420 | 936 | NP_974828.1 | 6 × 10-08 | arabinogalactan protein 41 [Arabidopsis thaliana] |
| 39283 | 597 | XP_002532467.1 | 5 × 10-10 | Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis] |
| XP_002888501.1 | 4 × 10-06 | kinase family protein [Arabidopsis lyrata subsp. lyrata] | ||
| 10708 | 1591 | XP_002274655.1 | 2 × 10-156 | PREDICTED: hypothetical protein [Vitis vinifera] |
| 27762 | 238 | Unknown Beta vulgaris subsp. vulgaris | ||
| 29113 | 532 | Unknown Beta vulgaris subsp. vulgaris | ||
| 32928 | 100 | Unknown Beta vulgaris subsp. vulgaris | ||
| 54739 | 168 | Unknown Beta vulgaris subsp. vulgaris | ||
| 79469 | 143 | Unknown Beta vulgaris subsp. vulgaris | ||
| 88173 | 286 | Unknown Beta vulgaris subsp. vulgaris | ||
| 94815 | 102 | Unknown Beta vulgaris subsp. vulgaris | ||
| 127929 | 100 | Unknown Beta vulgaris subsp. vulgaris | ||
| 136937 | 100 | Unknown Beta vulgaris subsp. vulgaris | ||
| 151222 | 100 | Unknown Beta vulgaris subsp. vulgaris | ||
| 174489 | 100 | Unknown Beta vulgaris subsp. vulgaris |