Table 2.
List of putative regulatory elements present in promoters of nine genes.
| Motif | Sequence | Function | PAL | C4H | HCT | C3H | HQT | CHS | F3H | DFR | ANS |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Box 4 | ATTAAT | light responsiveness | 3 | 4 | 2 | 1 | 2 | 1 | 4 | 1 | 2 |
| Box I | TTTCAAA | light responsive element | 1 | 3 | 2 | 2 | 1 | 1 | 3 | 2 | 2 |
| CGTCA-motif | CGTCA | MeJA-responsiveness | 2 | 0 | 1 | 0 | 0 | 2 | 0 | 3 | 0 |
| EIRE | TTCGACC | elicitor-responsive element | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ERE | ATTTCAAA | ethylene-responsive element | 1 | 2 | 2 | 1 | 0 | 0 | 1 | 0 | 0 |
| G-Box | CACGTN | light responsiveness | 2 | 0 | 4 | 0 | 1 | 5 | 2 | 8 | 1 |
| GA-motif | AAGGAAGA | part of a light responsive element | 0 | 0 | 0 | 0 | 2 | 0 | 1 | 0 | 1 |
| GATA-motif | GATAGGA | part of a light responsive element | 0 | 2 | 0 | 0 | 0 | 1 | 3 | 1 | 0 |
| GT1-motif | GGTTAA | light responsive element | 1 | 2 | 2 | 1 | 2 | 1 | 1 | 2 | 2 |
| HSE | AAAAAATTTC | heat stress responsiveness | 1 | 2 | 2 | 1 | 0 | 0 | 1 | 3 | 3 |
| I-box | AGATAAGG | part of a light responsive element | 1 | 2 | 0 | 0 | 1 | 0 | 3 | 2 | 2 |
| L-box | TCTCACCAACC | part of a light responsive element | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 1 | 0 |
| LTR | CCGAAA | low-temperature responsiveness | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| TC-rich repeats | RTTTTCTTMM | defense & stress responsiveness | 5 | 1 | 5 | 2 | 3 | 0 | 4 | 3 | 1 |
| TCT-motif | TCTTAC | part of a light responsive element | 1 | 2 | 3 | 1 | 0 | 1 | 0 | 0 | 0 |
| Circadian | CAANNNNATC | circadian control | 1 | 2 | 1 | 3 | 0 | 1 | 0 | 0 | 3 |
Number of times the element present in a specific promoter is given in the gene column. Standard IUPAC nucleotide codes were used for variable bases